Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3757 |
Symbol | |
ID | 5190312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4210977 |
End bp | 4212035 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588213 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001269065 |
Protein GI | 148548963 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.322144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGGCT GTAAGCCCAT GGCCCGCCCC CGCGTGCGCC TGGGCGAACT GTCGGTGGGT TTTGTCCAGC CTTTGAGCGA AGCCCTGCGC GAGCTGGGCC ACGACCCTGA ACCATTGCTG CGCCGCTACG GCCTGGACGC GACACGCCTG GGCGAAGCCG GCGCACGCCT GTCCATCCCC CGCTACATGC ATCTGGGCCA CGCAGCAATC GAAATGAGCG GCGAGGCTGC TCTAGGCCTG CGTATGGGGC GCCTGAGCCG TCTGGCGCAT GCTGGCCTGG CCGGGGTCAC CGCGGCCCAG GCCCCCACCT TGGGTGAGGC GGCGCGCACC CTGCTGCGCT TCGAGCCGCT TTACGCGGCC AACTACCGTG GCCATTCCCG CTTTGTGGAA GATGCCCAGG GCGCCTGGCT GCGCTTCTAC TCCATCAGCC CGTATAACGA CTACAACCGC TTTGTGGTCG ACTCACTGTT GGCCGGCTGG CTGGCCCAGT TGACCGACCT TGCCGGCACC CCAGTGCAGG CTGAACGCCT GGAGATCGAG TTTGCCGCGC CCTCCTATGC CGCCCGCTAC CAAACGCTCT GCAGCACGCC TGTGCAATTC GCCGCCGACG GCAATCAGCT GCGTCTGAGC CGCGCCACCT TGCAACTGGC CAACCCAGCG CATTGCCCAA GTACCTGGCA GCACCTGTTG CAGTTGTGCG AAGCAGAGCT GCTGCAGCGC ACGCGAGTGC GTAGCCTGGG TGAGCGCATT ACTCACCTGC TGGGCCCGCT GCTCAATGGC GGCCGTGAAC CGGACCTGGA GGAAGTGGCG CTGCACTTGC AACTGCCAAG CTGGACCTTG CGCCGCAAGC TCGCCGAAGA AGGCACGCGT TTTCGCGACT TGCTCAACGA AACACGGCGC GACCTGGCCG AGACCTACAT CCGTGATACG GAACTGGCCT TTGGCGAGAT AGCCTATCTG TTGGGGTTTG CTTCGGCCGA GGCCTTCCAG CGCGCATTCA AGCGCTGGAC GGGCCTCACG CCGGGGGCGT TCCGCCGCAG CCAGCGGCAG CCGGGCTAG
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Protein sequence | MCGCKPMARP RVRLGELSVG FVQPLSEALR ELGHDPEPLL RRYGLDATRL GEAGARLSIP RYMHLGHAAI EMSGEAALGL RMGRLSRLAH AGLAGVTAAQ APTLGEAART LLRFEPLYAA NYRGHSRFVE DAQGAWLRFY SISPYNDYNR FVVDSLLAGW LAQLTDLAGT PVQAERLEIE FAAPSYAARY QTLCSTPVQF AADGNQLRLS RATLQLANPA HCPSTWQHLL QLCEAELLQR TRVRSLGERI THLLGPLLNG GREPDLEEVA LHLQLPSWTL RRKLAEEGTR FRDLLNETRR DLAETYIRDT ELAFGEIAYL LGFASAEAFQ RAFKRWTGLT PGAFRRSQRQ PG
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