Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3751 |
Symbol | |
ID | 5192367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4201596 |
End bp | 4204808 |
Gene Length | 3213 bp |
Protein Length | 1070 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588207 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001269059 |
Protein GI | 148548957 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGT ACAACGCCCT GCTGGAAAAC CTGGCCCGCA GCTCTCTGCG CCTGAACAAA GGCATGACCG TCCTGCTGGG CCTGGCGCTG CTGCTGGCCG GCTTCAGTCT CTGGTCGCTC GAGCGCCTGA TCGACGAACA CAGCGACACG GTCAGCATCC ACTTCGCCCG GCTGATGGAG AATGTACAGG AGCAGGAAAC CTTCCTTGAG GCCCTCGTGC AACGCAGCGC CAAGGGGGAG TTGCTCGACT ACCCACGTGC GCTCGAGCCG GCGCTGGCAC CCATGCCCGA GGAAGGGCCG GACATCTACA AGGGCCAGAT CTTTCCATTT TCCATGCCGT TCAGCCTCAA ATTCGACCCA CGCAACCTGG CTGACCGCGA AGTATCGGAC ATCTTCACCC TGGGGGCGAA CCTGGCCAGC TTCTACAGCA TGTTCTGGTC GGCCTCTCCG TACCGATCGC CGCAGGTGTT CCTGTTCTCG CCGGATGCCC GTTACGACAT TACGGTTCCC GCCGCAGGAC GCGGGCGGGG CAAGCTGGAG AATGAACCGT TCATCGATGT GATCAGGCAG GTCATTGCGC GCCAGCCTCA GGACAAGGAA TGGGGCCCAG GCAGCAGGAT CGTCTGGCGC AGCTATGTCG AGCAGCCGGA CCAGGCCTCC CCGCCACGCG TGCTGGCCTA CGCCAACGTC CCCCTGCGCT CGGGCAAGGC AGAGGGCCAA GCCACGCAAG TTGCATCGCT GGTGGACCTG GCCCAGATCG ATGACTTCGA ACGCATCATG GACTGGACCG TGTATGACCA CTTTAACCTC ATCACCCCAG CCGGCGAGGT GCTGATCGGC GCGCCCGCGC CCCTGAAGGG GGTGCATGAA GGCCTCAACA TCAAGCCCGA AGGCCTGGTA TTCCGTCTCC ACGAACAGGC CAACGGTGGC TGGAGTGCGA TCTACACCGT GACCTACCGG CACTTCTTCC GTTACGCGTT CTGGTCGCTG GCCGGCATCG CCGCCACGTT CCTGGTCCTC ATCGGGCTGG GCCGGGTGGT CATCCGTTGG TATCAGCGCC AGGTCATCCT GCCTGCGCGC GCGGCCCACG AGATCATCAC CGAGAGCGAG GCCTTCAGCC GGGTGGTCAT CGACACCGCC CCGACCGGCC TGTGCGTGGT CCGCAGCGCC GACAACGAGG TGCTGCTGGA GAACCAGCGG GCGCAGCAAT GGCAGGGCAC CCGCGAGCTG GTCAGTACCC TCGCCTCGGC AGTGGGCCAC ACCCGCAGTG GCGAGCACTA CCTGCAGGTC GAAGGCCGCC ACCTGCAGGT CGGTTTCGTG TCGACCCGCT ACCACGGCGA AGACGTGCGC CTTTACGCAT TCAACGACGT CACCCGCCAT GTCGAGGACG CCCAGGCGCT CGACGAAGCC CGGCGCGCCG CCGACGCCGC CAACACCGCC AAGACCCTGT TCCTGGCCAC CATGAGCCAC GAGATCCGTA CCCCGTTGTA CGGCGTGCTG GGCACCCTCG AGCTGCTTGG CCTGACGCAC CTGGATGCAC GCCAGCAAGG CTACCTGCAC ACTATCCAGC GCTCCTCGGC AACCCTGTTC CAGCTGATCA GTGACGTGCT CGACGTGACC AAGATCGAAT CCGGGCAGAT GGCGCTCGAA CCCGTGCCGT TCTGCCCGCT GGACATGCTC GAGGACACCG TGCGCACCTA TCGCGCCTTC GCCGAGCGCA AGGGCCTGTT GCTCTATGCC TGCCATGACG CCCGCCTGCC GGCGCAGGTG GTGGGCGATC CGATACGCAT CCGCCAGATC CTCAACAACC TGCTGAGCAA CGCCATCAAG TTCACCGACA CCGGCCGGGT GGTGCTGCGC ACCCGCGTGC TGGCGCTCGA CGACACCCAC GTGCGCCTGC AATGGCAGGT TGCCGATAGC GGCATTGGCA TTTCCCAGGC ACAGCAGGCC AGGCTCTTCG AGCTGTTCTA CCAGGTCGCC GACGCCTCCA GCGAGGGCGG TGCGGGCCTG GGCCTGCCGA TCTGCGGCTG GCTGGCCGAC ATGATGGGTG GCCAGATCAA GGTGGTCAGT GAGCCGGGGC TGGGCAGCAG CTTTTCCCTC AACATCAGCC TGCCACTGGC CCAGGGGGCG CTGAGCGACA GCCCAAGCGC AGTGCCCGAC CCGACCCCGG TGTATGTGCG TGCGCCGATA CCGGAGCTTG CCCAGCATGG CGTCGACTGG CTGCAGCGCC TGGGTATCGC CGCGACCCTG ACGATTCCCC CCCTGGAGAA GGACAACCAC CAGGCCCTGC TGGTAGACCT GCTCGACTGC CCGGACGCCG CCACCTGGCA TGGCCAACGG ATCTGCGCCA GCAGCGACGG CCCTACCCCC GGCGCGTTCG TCGACGGCTG CTGGCGGGTA GACCTGCATG ACGTGCGGGC CATCGCCCAG CTCATCGCGG TCGTGCGCCA GGGCGGGTCG CCCGATGACC AGAACACCGC GCAACAGCAA CGCGCCGCTC TGCGCCTGCA TATCCTGGTG GCCGAGGACA ATCCGATCAA CCAGGCGATC CTGCAGGAGC AACTCGAGGC GCTGGGCTGC ACCACGGTGG TCGCGACCAA CGGTGAACAG GCCATGCAAC GCTGGCAGCC AGGCCTGTTC GACCTGGTCC TGACCGACGT AAACATGCCA TTGATGAATG GCTACGAACT GGCCAGGACC CTGCGCCAGC ACGACGCCCG GTTGCCGATC ATCGGCGTCA CCGCCAATGC ACTGCGAGAA GAAGGCCAGC GCTGCCTCGA GGTGGGCATG AATGCCTGGA TGGTCAAACC GTTGAGCCTG CAGGCGTTGC GCAGCCATCT GGTCCGTCTG TGTCGGCCAG CACTGGCCGA AGCACCCAGC CGCGCGCAAG CGGACAGCCT CAGCGCCTCC CCCTCCCCTG CAGCCACCGA TACCGTGCAA GTGTCCGACG CCATGCGCGC GCTGTTCATC ACCACCCTGC GCGAGGATAT GCAGCAGTTG CGCCTGGCCC TTGAGCAAGG CGACCAGCGG CGTCTTGGCG AGCGCCTGCA CAGCATCGCC GGCGCCCTAG GCGCGGTACA GTCCCGGCCC CTGGCCGAGC AGTGCTGTGC GCTGGAAACC GCGCTGGCCG AGTCGCCGCT CGACGCAGCC CTGGCCGATA AGCTGGGGGG GGTGCTGGAC AGGCTGTCAG CAATACTCGA TGCCCTCGCA TAG
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Protein sequence | MKQYNALLEN LARSSLRLNK GMTVLLGLAL LLAGFSLWSL ERLIDEHSDT VSIHFARLME NVQEQETFLE ALVQRSAKGE LLDYPRALEP ALAPMPEEGP DIYKGQIFPF SMPFSLKFDP RNLADREVSD IFTLGANLAS FYSMFWSASP YRSPQVFLFS PDARYDITVP AAGRGRGKLE NEPFIDVIRQ VIARQPQDKE WGPGSRIVWR SYVEQPDQAS PPRVLAYANV PLRSGKAEGQ ATQVASLVDL AQIDDFERIM DWTVYDHFNL ITPAGEVLIG APAPLKGVHE GLNIKPEGLV FRLHEQANGG WSAIYTVTYR HFFRYAFWSL AGIAATFLVL IGLGRVVIRW YQRQVILPAR AAHEIITESE AFSRVVIDTA PTGLCVVRSA DNEVLLENQR AQQWQGTREL VSTLASAVGH TRSGEHYLQV EGRHLQVGFV STRYHGEDVR LYAFNDVTRH VEDAQALDEA RRAADAANTA KTLFLATMSH EIRTPLYGVL GTLELLGLTH LDARQQGYLH TIQRSSATLF QLISDVLDVT KIESGQMALE PVPFCPLDML EDTVRTYRAF AERKGLLLYA CHDARLPAQV VGDPIRIRQI LNNLLSNAIK FTDTGRVVLR TRVLALDDTH VRLQWQVADS GIGISQAQQA RLFELFYQVA DASSEGGAGL GLPICGWLAD MMGGQIKVVS EPGLGSSFSL NISLPLAQGA LSDSPSAVPD PTPVYVRAPI PELAQHGVDW LQRLGIAATL TIPPLEKDNH QALLVDLLDC PDAATWHGQR ICASSDGPTP GAFVDGCWRV DLHDVRAIAQ LIAVVRQGGS PDDQNTAQQQ RAALRLHILV AEDNPINQAI LQEQLEALGC TTVVATNGEQ AMQRWQPGLF DLVLTDVNMP LMNGYELART LRQHDARLPI IGVTANALRE EGQRCLEVGM NAWMVKPLSL QALRSHLVRL CRPALAEAPS RAQADSLSAS PSPAATDTVQ VSDAMRALFI TTLREDMQQL RLALEQGDQR RLGERLHSIA GALGAVQSRP LAEQCCALET ALAESPLDAA LADKLGGVLD RLSAILDALA
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