Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3735 |
Symbol | |
ID | 5191354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4186265 |
End bp | 4187173 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640588191 |
Product | AraC-like transcriptional regulator |
Protein accession | YP_001269043 |
Protein GI | 148548941 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00901057 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGATC TGGACGATGA GCTGACACGC CTCAGGGCCG AACTGGCATC AGCGATGCAA CGTTTTGCTC CGACATACGG CGTCTATCAA ACGGCGATCG ATCCGTTGCA TTTCATACGC AGCGACACGC CAACAGATGT CATCCATACG GTTCATAAAC CGGGATTGTG CATAATTGTA CAGGGCCGGA AACAGATCCA GTTGTGGGAT GAAAGCTATA CCTACGATCA ACTGAACTAT CTGGTTGTCT CTGTGACACT GCCTCTGGCT GGGCAAGTGA CCGAGGCCTC TCCAGAGAAG CCCTACTTCT GCATTCGCCT GGATATCGAC CCGGCAGAAA TCGCTCAGCT GATTGCCGAC GTCAGCCCGA TCGGCGTACC CAGCCAGCCA TCTCGTCGCG GCCTCTATCT GGACAGGATT GATACCCCAT TGCTTGATGC CATGTTGCGA CTGGTACGTC TGTTGGATGT GCCCTCCGAT ATCCCGGCAT TGGCTCCGCT GGCCCTCAGG GAAATATTCT ACCGGTTGCT CAAAGGCCAG CAGGGCCAGC GATTACATGA GATAGCCATC AACGACAGCC AGACCCACCG GGTGACAAGA GCTATCGAAT GGTTGAACAA CAACTATGCG CAGCCGCTGC ACATCGATGA GTTGGCGAGC TATGTCAATT TGAGTAATTC CACGCTTCAC CACCGATTCA AGGCAATCAC CGCGATGAGC CCGTTGCAGT ACCAGAAACA ACTGCGCCTG CAGCACGCAC GAAGGTTGAT GATTTCAGAA GGGCTGGATG TTTCCACGGC CGGGTTCACG GTGGGCTATG AGAGCCCGTC ACAGTTCAGC CGAGAATACA GCCGGATGTT CGGAGCCCCT CCAAGCAAGG ACATCGCAAA GATTCGATCG ATGGGATGA
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Protein sequence | MSDLDDELTR LRAELASAMQ RFAPTYGVYQ TAIDPLHFIR SDTPTDVIHT VHKPGLCIIV QGRKQIQLWD ESYTYDQLNY LVVSVTLPLA GQVTEASPEK PYFCIRLDID PAEIAQLIAD VSPIGVPSQP SRRGLYLDRI DTPLLDAMLR LVRLLDVPSD IPALAPLALR EIFYRLLKGQ QGQRLHEIAI NDSQTHRVTR AIEWLNNNYA QPLHIDELAS YVNLSNSTLH HRFKAITAMS PLQYQKQLRL QHARRLMISE GLDVSTAGFT VGYESPSQFS REYSRMFGAP PSKDIAKIRS MG
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