Gene Pput_3735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3735 
Symbol 
ID5191354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4186265 
End bp4187173 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content55% 
IMG OID640588191 
ProductAraC-like transcriptional regulator 
Protein accessionYP_001269043 
Protein GI148548941 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00901057 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATC TGGACGATGA GCTGACACGC CTCAGGGCCG AACTGGCATC AGCGATGCAA 
CGTTTTGCTC CGACATACGG CGTCTATCAA ACGGCGATCG ATCCGTTGCA TTTCATACGC
AGCGACACGC CAACAGATGT CATCCATACG GTTCATAAAC CGGGATTGTG CATAATTGTA
CAGGGCCGGA AACAGATCCA GTTGTGGGAT GAAAGCTATA CCTACGATCA ACTGAACTAT
CTGGTTGTCT CTGTGACACT GCCTCTGGCT GGGCAAGTGA CCGAGGCCTC TCCAGAGAAG
CCCTACTTCT GCATTCGCCT GGATATCGAC CCGGCAGAAA TCGCTCAGCT GATTGCCGAC
GTCAGCCCGA TCGGCGTACC CAGCCAGCCA TCTCGTCGCG GCCTCTATCT GGACAGGATT
GATACCCCAT TGCTTGATGC CATGTTGCGA CTGGTACGTC TGTTGGATGT GCCCTCCGAT
ATCCCGGCAT TGGCTCCGCT GGCCCTCAGG GAAATATTCT ACCGGTTGCT CAAAGGCCAG
CAGGGCCAGC GATTACATGA GATAGCCATC AACGACAGCC AGACCCACCG GGTGACAAGA
GCTATCGAAT GGTTGAACAA CAACTATGCG CAGCCGCTGC ACATCGATGA GTTGGCGAGC
TATGTCAATT TGAGTAATTC CACGCTTCAC CACCGATTCA AGGCAATCAC CGCGATGAGC
CCGTTGCAGT ACCAGAAACA ACTGCGCCTG CAGCACGCAC GAAGGTTGAT GATTTCAGAA
GGGCTGGATG TTTCCACGGC CGGGTTCACG GTGGGCTATG AGAGCCCGTC ACAGTTCAGC
CGAGAATACA GCCGGATGTT CGGAGCCCCT CCAAGCAAGG ACATCGCAAA GATTCGATCG
ATGGGATGA
 
Protein sequence
MSDLDDELTR LRAELASAMQ RFAPTYGVYQ TAIDPLHFIR SDTPTDVIHT VHKPGLCIIV 
QGRKQIQLWD ESYTYDQLNY LVVSVTLPLA GQVTEASPEK PYFCIRLDID PAEIAQLIAD
VSPIGVPSQP SRRGLYLDRI DTPLLDAMLR LVRLLDVPSD IPALAPLALR EIFYRLLKGQ
QGQRLHEIAI NDSQTHRVTR AIEWLNNNYA QPLHIDELAS YVNLSNSTLH HRFKAITAMS
PLQYQKQLRL QHARRLMISE GLDVSTAGFT VGYESPSQFS REYSRMFGAP PSKDIAKIRS
MG