Gene Pput_3725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3725 
SymbolpepN 
ID5191395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4174598 
End bp4177255 
Gene Length2658 bp 
Protein Length885 aa 
Translation table11 
GC content63% 
IMG OID640588181 
Productaminopeptidase N 
Protein accessionYP_001269033 
Protein GI148548931 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID[TIGR02414] aminopeptidase N, Escherichia coli type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCG AACAACCGCA AGTGATCTAC CTCAAGGATT ACCAGGCGCC GGAGTACCTG 
ATCGACGAGA CGCACCTGAC CTTCGAGCTG TTCGAGGACC ACACGCTGGT TCACGCGCAA
CTGGTCATGC GCCGCAACCC GGCACGCGGT GCCGGCCTGC CGCCACTGGA ACTCGATGGC
CAGCAGCTGG AACTGCTGCG CGCCTCCCTG GATGACCAGG AATTGCAGCC AGGCGACTAC
CGGCTCGACG CCGACAGCCT GACCATTCAG CCCAAGGCCG AGCGGTTCAC CCTCGACACC
AGCGTGAAGA TCCACCCGGA AAGCAACACC GCCCTGGAAG GCCTGTACAA GTCGGGCAAG
ATGTTCTGCA CCCAGTGCGA GGCCGAGGGC TTCCGCAAGA TTACCTACTA CCTCGACCGC
CCGGACGTGA TGAGCACCTT CACCACCACG GTCATCGCCG AGCAGCATCG CTACCCGGTC
TTGCTGTCGA ACGGCAACCC GATCGGCAGC GGCCCGGCCG AAGACGGCCG TCACTGGGCG
ACCTGGGAAG ACCCGTTCAT GAAGCCGGCC TACCTGTTCG CCCTGGTGGC CGGTGACCTG
TGGTGCGTTG AAGACAGCTT CACCCGCCAG TCCGGCCGTG AGGTGACCCT GCGCATCTAC
GTCGAGCCCG AGAATATCGA CAAGTGCGAC CACGCCATGG TCAGCCTGAA AAAGTCTATG
CGCTGGGACG AAGAAGTCTA TGGCCGCGAG TACGACCTGG ACATCTTCAT GATTGTTGCG
GTCAATGACT TCAACATGGG CGCCATGGAA AACAAGGGCC TGAACATCTT CAACTCCAGC
TGTGTGCTGG CCCGCGCCGA AACCGCCACC GATGCTGCGC ACCAGCGCGT CGAAGGGGTG
GTCGCTCACG AGTATTTCCA CAACTGGTCG GGCAACCGTG TCACCTGCCG TGACTGGTTC
CAGCTGTCGC TGAAGGAAGG CTTCACGGTG TTCCGCGATG CCGAGTTCAG TGCCGACATG
AACTCGCGCA CGGTCAAGCG CATCGAAGAC GTCGCCTACC TGCGCACCCA CCAGTTCGCC
GAAGACGCCG GCCCCATGGC CCACCCGGTG CGCCCGGACA GCTTCATCGA AATCTCCAAC
TTCTACACCC TGACCGTCTA CGAGAAGGGC GCCGAAGTGG TGCGCATGGT CCGCACCCTG
TTGGGTACCG AAGGCTTCCG TAAAGGCAGC GACCTGTACT TTGAACGTCA CGATGGCCAG
GCGGTAACCA CCGACGACTT CATCAAGGCC ATGGAAGACG CCAATGGCGT CGACTTTACC
CAGTTCAAGC GCTGGTACAG CCAGGCGGGT ACCCCGCGTC TGGAGGTCAG CGAGGCGTAT
GACGCCGCCG CGCAGACCTA CAGCCTGACG TTCCGCCAGA GCTGCCCGCA GACCCCTGAC
AAGGCCGAGA AACTGCCGTT CGTGATCCCG GTGGAGCTGG GCCTGCTGGA TGCCGCCGGC
AACGATCTGC CGCTGCAGTT GGCGGGCGAA GAGGCCGCTC AAGGGACCAG CCGCGTGCTG
TCGGTGACCG AGGCCGAGCA AACCTTCACC TTCCAGGGCA TTCAGGCCAA GCCGCTGCCG
TCGCTGCTGC GTGGCTTCAG CGCCCCGGTG AAGCTGAGCT TCCCGTATGA CCGCGACCAG
CTGATGTTCC TGATGCAGCA CGACAGCGAC GGCTTCAACC GCTGGGAAGC GGGCCAGCAG
CTGTCGGTGC AGGTACTGCA GGAACTGATC GGCCAGCATC AACGCGGTGA AGCCCTGAAG
CTCGACCAGC GCCTGATCAC CGCCCTGGGC ACTGTGCTGG GCAACGAATC GCTGGACCCG
GCCATGGTGG CCGAAATGCT CTCGCTGCCA GGTGAGGCGT ACCTTACCGA GATCAGCCAG
GTGGCCGACG TCGACGCCAT CCACGCCGCC CGTGAGTTCG CACGCCAGCA GATCGCCGAA
CACTTGTTCG ACGCCCTGTG GGCGCGTTAC CAGGCCAACC GTGCAGTGTC GCGCAGCACT
GCCTATGTGG CCTCGGCCGA GCACTTTGCC CGCCGCAGCC TGCAGAACAT CGCCCTGTCG
TACCTGATGC AGAGTGGCAA GCAACAGGTG CTGGACGCGA CCCTGGAGCA GTTCGAGCAC
TGCGACAACA TGACCGAGCG CCTTACCGCG CTGGCGGTAC TGGTCAACTC GCCGTTCGAG
GCCGAGCGCG CCAAAGCGCT GGAGGCCTTT GCCGAGCACT TCAAGGACAA CCCGCTGGTC
ATGGACCAAT GGTTCAGCGT GCAGGCGGCC AGCACGCTGC CGGGCGGGCT GGCGCGGGTC
AAGGCGTTGA TGCAGCACCC GGCCTTTACC CTGAAGAACC CGAACAAGGT GCGTGCGCTG
ATCGGTGCCT TTGCCGGGCA GAACCTGGTC AACTTCCATG CTGCCGATGG CTCCGGGTAT
CGCTTCCTGG CGGACCTGGT GATCGAGCTG AATGCGCTGA ATCCGCAGAT TGCATCGCGG
CAACTGGCGC CGCTGACACG CTGGCGCAAG TATGACGATG CGCGTCAGGC GCTGATGAAG
GGTGAGCTGG AGCGCATTCT GGCTTCGGGT GAGTTGTCCA GTGATGTGTA TGAGGTTGTG
AGCAAGAGTC TGGCGTAA
 
Protein sequence
MRTEQPQVIY LKDYQAPEYL IDETHLTFEL FEDHTLVHAQ LVMRRNPARG AGLPPLELDG 
QQLELLRASL DDQELQPGDY RLDADSLTIQ PKAERFTLDT SVKIHPESNT ALEGLYKSGK
MFCTQCEAEG FRKITYYLDR PDVMSTFTTT VIAEQHRYPV LLSNGNPIGS GPAEDGRHWA
TWEDPFMKPA YLFALVAGDL WCVEDSFTRQ SGREVTLRIY VEPENIDKCD HAMVSLKKSM
RWDEEVYGRE YDLDIFMIVA VNDFNMGAME NKGLNIFNSS CVLARAETAT DAAHQRVEGV
VAHEYFHNWS GNRVTCRDWF QLSLKEGFTV FRDAEFSADM NSRTVKRIED VAYLRTHQFA
EDAGPMAHPV RPDSFIEISN FYTLTVYEKG AEVVRMVRTL LGTEGFRKGS DLYFERHDGQ
AVTTDDFIKA MEDANGVDFT QFKRWYSQAG TPRLEVSEAY DAAAQTYSLT FRQSCPQTPD
KAEKLPFVIP VELGLLDAAG NDLPLQLAGE EAAQGTSRVL SVTEAEQTFT FQGIQAKPLP
SLLRGFSAPV KLSFPYDRDQ LMFLMQHDSD GFNRWEAGQQ LSVQVLQELI GQHQRGEALK
LDQRLITALG TVLGNESLDP AMVAEMLSLP GEAYLTEISQ VADVDAIHAA REFARQQIAE
HLFDALWARY QANRAVSRST AYVASAEHFA RRSLQNIALS YLMQSGKQQV LDATLEQFEH
CDNMTERLTA LAVLVNSPFE AERAKALEAF AEHFKDNPLV MDQWFSVQAA STLPGGLARV
KALMQHPAFT LKNPNKVRAL IGAFAGQNLV NFHAADGSGY RFLADLVIEL NALNPQIASR
QLAPLTRWRK YDDARQALMK GELERILASG ELSSDVYEVV SKSLA