| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3718 |
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| Symbol | |
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| ID | 5190229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4164746 |
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| End bp | 4168390 |
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| Gene Length | 3645 bp |
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| Protein Length | 1214 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588174 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001269026 |
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| Protein GI | 148548924 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC TCGCCATCCG CCTGAAGAAC CTGGCATCGC TGGCCGGCCC GATCGACATC
GATTTCACCG CAGAACCGTT GGCCAGCGCT GGCCTGTTCG CTATCACCGG GCCTACCGGT
GCTGGCAAGA GCACCTTGCT TGACGCCCTG TGCCTGGCGC TGTTCGGCAC CGTGCCGCGC
CTCAATGCCA TTGGCCGTGA GGCCAAGGTG CCGGACGCCG ACGGCGACAT CCCCACCTCC
GACCCGCGCA ACCTGCTGCG CCGTGGCACC GGCAGCGGGT TTGCCGAGGT CGATTTCGTC
GGCATCGACG GCCGCCGCTA CCGCGCCCGC TGGGAAGCCA ACCGCGCCCG CGACAAGGCC
AACGGCAAAC TGCAGCACAG CCGTCAAAGC TTCTACGACC TCGACAGCGA GCAAGTGCTC
GGCAGTGGCA AGAACGAATA CAAGCAACTG GTCGAAGCCC GTTTGGGCCT GAACTTCGAA
CAGTTCACCC GTGCGGTGAT GCTGGCCCAG AGCGAGTTCG GCGCGTTCCT CAAGGCCGAC
GACAAAGACC GCAGCGAGTT GCTGGAAAAG CTCACCAACA CCGCGATCTA CACCCGCCTG
GGCCAGCGTG CCTTCAGCAA GGCGCGCGAA GCCGGCGAGG CGCACAACAC CCTGAAAGAG
CGCGCCAGCC ACCTGCTGCC GATGGCTGCC GAGGCCCGTG CCGAGCTCGA CAAGCGCCTG
GAGCAGGCGC AGCAGCAGTT CAAGGCCGAC CAGGCCGGCG AGCGCCAGCT GGAGCAGCAA
CGCAACTGGC TGAATGAACA ATGCCAGCTA CAGGCCCAAC ACACCGAAGC CAGCACCACG
CTGCAGGCCG CCGAACTGGA CTGGCAACAG CTGGCCGAAC CACGCCTGGA CCTGGCACGC
CTGGAGCGCC TGGCCCCACA GCGTCACCAG TTCCACCGCC GACAGGCCCT GAGCGCACAG
CTGGCGCCAG TGGCCGCGAA AATGGCCGAA CAGCAACAGC AGCAAGCCGA ACTGCAGGTG
CGCACCCGCG AGCTCGAACA GGCGCTGGAC ACTGCGCGCC AAGCGCTTGC GGACCGCCAG
GCCCAGCACA GCGAGAACGC GCCGCGCCTG CGCCAGGCCT TTGCCGCCCA GGACAGTCTG
GCACGCCTGG ACCAGGAGCT GGCCGCCCAG CGCAGCATCA GCCAACAGGC CCAACAACAG
GTCGCTGACG GCCAGCAGCA ACTGCAGCAG CTGGAAGACA ACCAGCAGCG CAGCGTGCAG
CAACTGGCGC AGATCGACAC CGCGCTTGCC GACAGCCAGC ACCTGGCGGG CCTGGCCAAT
GCCTGGCACG CCTACCTGCC GCAACTGAAA CAGGTGATGC TGATCGGTGG CCGCCTGACC
AAGGGCCGAG AAGAGCTACC CGGCTTGCAG GCCCAGGCCA GCCAGGCCAA TGCGCACCTG
CAGGCCGAGC GCGATGCCTA CGACCTGTTG TTCCGTGAAG CCAAGGCCGA ACCCCAGGCC
CTGGCCGAAC AGATCGACCT GCTCGGCGGC ATGCTGCAGG ACAACCGCAA ACAGCAGCGC
GCCGTAGAAG AAATGTCACG CCTGCACGGC CGTGAACAGG AGCTGCGCCA GCAGCTGGAT
GCCCTGCGCG AACGGCAGCA GCAGGCCATG CTGCAACGCC AGCAACTGAT TACCGAAGGC
ACCGCCGCCA AGGCCGAGCT GGAGGCCGCC GAGCAGGCGT TGATCCTCAC CCGTCAACTG
CTGGAACGGC AACGCCTGGC ACGCAACACC AGCGTCGAAG AACTGCGTGA CCAACTGCGT
GACGGCGAAC CCTGCCCGGT CTGTGGCAGC GCCGAACACC CCTTCCATCA GCCAGAAGCG
CTGCTGCAGA GCTTGGGTCG CCATGACCAG GCCGAAGAGC ACGCCGCGCA GAAGCAGGTC
GAAACGCTCA ACAACACGCT GGTGGAGCTG CGTACCCAGC TGGGTGTGGT CAATGCCCAG
CTCAAGGACT TCCAGCAGCA ACAGCAGCAA CTGGGCGAAC AGTTGCAACC GCTGGTGGCT
CAGGTACAGG CACACAGCCT ATGGCCAGCC CTCGCCCCGC AGGACGACAA GGCCCGTAGC
ACCTGGCTCG ACAGCCAGCT GCGTCGCCTG GATGAAGAAA TCAGCCAGGA CGAGAAACGC
CAGAGCGCCC TGCTGGCCCT GCAAAAAGAC GCCGCCCGCC TGAACCAGCA ATTGCAGGCG
GCCCACGACG CCCAGCAACA GGCCCAACGC CATCTGGAGC AACAGCACCA AGCCCTGGCC
AACGACGAAC AGCTGTTGCA GCAAGGCCTG AACGACCTGG CCGGCGTACT GCCAGAGGAA
GCGCTCAAGG CCCTCAACGA CGACCCGGCC AATGCCTTCC TCGCCCTCGA CCAGCAGATT
GCCCAGCGCC TGCAGCAACT GGAACAGCGC AAGGACGAAC AGGAAGAACA GCAAGCCCGG
CAAGCCCAGC TGGACAAACT GCGCGATCAG CAACAGGCGC GCGTGCAAGG CCTGCAACAG
TTGCAACACA CGCTCGCGGC CCTCGACGAA CAGCGCCAGC AGGCCCAGAC GTCGCTCGGC
GAGCTGCTAG GCGAACATGC CAGTGCCGAA GCCTGCCAGC AGCATATGGA AGCCACGCTG
GAACAAGCCC GCGCCCTCGA TGCCGACACC GCCCAGCGCC TGCAAGATCT GCGCACCCAA
GGCGTGCAAC TGGCCAGCGA GCTCAAGGCC AATACCCAGC AACAACAGGC ACTGGATGCC
GAATGCCAAC AGTTGCAGGC CCAGATCGCC CAGTGGCGCA GCGAGCATCC GGAACTGGAC
GATGCCGGCC TCGATCGCCT GCTGGCCATG GATGACGCGC AAGTCAATGA ATTGCGCCAG
CGTTTGCAAG GCGCGGAAAA AGCCATCGAG CAGGGCCGCG TGCTGCTGCA GGAACGTGAG
CAGCGCCTGC AACAACACGC CGCACAAATG ACCGTGGACA CCTCGGCCGA AGCCTTGGAA
CACGCCCTGA CCGAGCTGCG CGGGCGGCTG GTCAACCATG AGCAGCAGTG CGCCGAATTG
CGTGCACAAC AGGCCGACGA TCAGCGCCGC CAGCAGGCCC ACCAGGCGCT GGCGGCAGAA
ATCGAACAGG CCCACCAGCA GTGGCAACGC TGGGCCCGCC TCAATGCCCT GATCGGTTCG
GCCTCCGGTG ATGTGTTCCG CAAGATCGCC CAAGGCTACA ACCTTGATCT GCTGCTGCAC
CACGCCAACG CCCAGCTACG TCAGCTGGCC CGTCGCTACC GCCTCAAGCG CGGCGGCAGC
GCCCTTGGCC TGCTGGTGCT GGACACCGAG ATGGGCGACG AACTGCGTTC GGTGCACTCG
TTGTCGGGCG GGGAAACCTT CCTGGTGTCG CTGGCCCTGG CGCTGGGCCT GGCGTCGATG
GCGTCCAGCA CCTTGCGTAT CGAGTCGCTG TTCATCGACG AAGGCTTCGG CAGCCTCGAC
CCCGAGTCGC TGCAACTGGC AATGGACGCC CTCGACGGCT TGCAAGCCCA GGGCCGCAAA
GTGGCGGTGA TTTCCCACGT ACAGGAAATG CACGAGCGCA TCCCGGTGCA GATCCAGGTG
CGGCGCCAGG GTAATGGCCT CAGTGACGTG GAGGTGTGCG GGTGA
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| Protein sequence | MKILAIRLKN LASLAGPIDI DFTAEPLASA GLFAITGPTG AGKSTLLDAL CLALFGTVPR
LNAIGREAKV PDADGDIPTS DPRNLLRRGT GSGFAEVDFV GIDGRRYRAR WEANRARDKA
NGKLQHSRQS FYDLDSEQVL GSGKNEYKQL VEARLGLNFE QFTRAVMLAQ SEFGAFLKAD
DKDRSELLEK LTNTAIYTRL GQRAFSKARE AGEAHNTLKE RASHLLPMAA EARAELDKRL
EQAQQQFKAD QAGERQLEQQ RNWLNEQCQL QAQHTEASTT LQAAELDWQQ LAEPRLDLAR
LERLAPQRHQ FHRRQALSAQ LAPVAAKMAE QQQQQAELQV RTRELEQALD TARQALADRQ
AQHSENAPRL RQAFAAQDSL ARLDQELAAQ RSISQQAQQQ VADGQQQLQQ LEDNQQRSVQ
QLAQIDTALA DSQHLAGLAN AWHAYLPQLK QVMLIGGRLT KGREELPGLQ AQASQANAHL
QAERDAYDLL FREAKAEPQA LAEQIDLLGG MLQDNRKQQR AVEEMSRLHG REQELRQQLD
ALRERQQQAM LQRQQLITEG TAAKAELEAA EQALILTRQL LERQRLARNT SVEELRDQLR
DGEPCPVCGS AEHPFHQPEA LLQSLGRHDQ AEEHAAQKQV ETLNNTLVEL RTQLGVVNAQ
LKDFQQQQQQ LGEQLQPLVA QVQAHSLWPA LAPQDDKARS TWLDSQLRRL DEEISQDEKR
QSALLALQKD AARLNQQLQA AHDAQQQAQR HLEQQHQALA NDEQLLQQGL NDLAGVLPEE
ALKALNDDPA NAFLALDQQI AQRLQQLEQR KDEQEEQQAR QAQLDKLRDQ QQARVQGLQQ
LQHTLAALDE QRQQAQTSLG ELLGEHASAE ACQQHMEATL EQARALDADT AQRLQDLRTQ
GVQLASELKA NTQQQQALDA ECQQLQAQIA QWRSEHPELD DAGLDRLLAM DDAQVNELRQ
RLQGAEKAIE QGRVLLQERE QRLQQHAAQM TVDTSAEALE HALTELRGRL VNHEQQCAEL
RAQQADDQRR QQAHQALAAE IEQAHQQWQR WARLNALIGS ASGDVFRKIA QGYNLDLLLH
HANAQLRQLA RRYRLKRGGS ALGLLVLDTE MGDELRSVHS LSGGETFLVS LALALGLASM
ASSTLRIESL FIDEGFGSLD PESLQLAMDA LDGLQAQGRK VAVISHVQEM HERIPVQIQV
RRQGNGLSDV EVCG
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