| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3717 |
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| Symbol | |
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| ID | 5190228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4163511 |
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| End bp | 4164749 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588173 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_001269025 |
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| Protein GI | 148548923 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTGT TTCATACCTC CGACTGGCAC CTGGGCCAAA GCCTGCACGG CCAGGAACGC
GACTTCGAAC ACGCCTGCTT CCTCGACTGG CTGCTCGGCC AGCTGCGCCT GCGCCAGCCG
GATGCGCTGC TGATTGCGGG CGACATCTTC GACACCGTCA ACCCACCCGT CAAAGCCCAG
GAACGCCTCT ACGACTTCAT CGTCCAGGCC CATGAGCAAC AGCCCAAGCT GGACATTGTG
ATGATCGCCG GCAACCACGA CTCCGGTTCG CGCATCGAGC TGCCCGCCGC ACTCATGCGC
CGCCTGCGCA CCCATGCGTT GGGCCGTGTG CACTGGCTGG ACGAGGGTCA GCTGGATGCC
GAGCGCCTGT TGATTCCGCT GACCAACGGC CGGGGCAAGG TCGCTGCCTG GTGCCTGGCC
CTGCCCTTCC TGCGGCCGGC CGAAGTCACC GGCCCGCAGC TGGGTGACGA TTACCTGCAA
GGCATCACCC AGGTGCACCA GCAACTGATC GCCGCCGCCC TGAAGAAACG CAAGAAAGAC
CAGGCGCTGA TCGCCATCAG CCACGCGCAC ATGGCCGGTG GCGCGGTGTC GGAAGACTCC
GAACGCAGCC TGATCATCGG CAACGCCGAG GCGCTGCCGG CCAAGCTGTT CGACAAGGCT
ATCAGCTACG TCGCCCTGGG CCATCTGCAC AAACCGCAGA AGGTCAACCG CGAAGAACGC
ATCCGCTACA GCGGCTCGCC AATCCCGCTG TCGTTCGCCG AAATCAACTA CCCGCACCAG
GTCCTGGAAG TGGAGCTGGA CGGCAACGGC CTGGTCAGCG TCGAGCCACG CCCCGTACCA
CGCGCCGTGG CCCTGCAACG GGTGGGCCCG GCACCGCTGG GCGAGCTGTT GCAGCAACTG
GCCGACCTGC CCGTGATCGA CCTGCTTGAA GACCCCAACC GCCAGCCCTG GCTGGAGGTG
CGGGTGATGC TCGACGAGCC GCAACCCGAC CTGCGCCAGC AGATCGAAAC CGCGCTTGAA
GGCAAGGCGG TACGGTTGAT CCGCATCAGC GCCGAGTACG CCGGCCGCAA CAACGCCGAG
GACGATGACC TGGCCTTTGT CGAACTGGCC CAGATGACCC CGCAAGACCT GTTCAGCCGC
GCCTGGGAGC AAGCCTACGG CAACCCCGCC GACGAGCAGG CGCTGGCCGA CTTCGCCCTG
CTGTTGCAGG ACGTGCAGCA GGAAGAGGAA CAGCCATGA
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| Protein sequence | MRLFHTSDWH LGQSLHGQER DFEHACFLDW LLGQLRLRQP DALLIAGDIF DTVNPPVKAQ
ERLYDFIVQA HEQQPKLDIV MIAGNHDSGS RIELPAALMR RLRTHALGRV HWLDEGQLDA
ERLLIPLTNG RGKVAAWCLA LPFLRPAEVT GPQLGDDYLQ GITQVHQQLI AAALKKRKKD
QALIAISHAH MAGGAVSEDS ERSLIIGNAE ALPAKLFDKA ISYVALGHLH KPQKVNREER
IRYSGSPIPL SFAEINYPHQ VLEVELDGNG LVSVEPRPVP RAVALQRVGP APLGELLQQL
ADLPVIDLLE DPNRQPWLEV RVMLDEPQPD LRQQIETALE GKAVRLIRIS AEYAGRNNAE
DDDLAFVELA QMTPQDLFSR AWEQAYGNPA DEQALADFAL LLQDVQQEEE QP
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