Gene Pput_3705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3705 
Symbol 
ID5191368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4149778 
End bp4150560 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID640588161 
Productclass II aldolase/adducin domain protein 
Protein accessionYP_001269013 
Protein GI148548911 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.993154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA CCATGCACAC CCCCAAGGAC CAGCTTGTCA AACTCGCCCA GCAACAGATG 
CTGACGGCGC TGACCGACAA CACCTACACC GTACGACAAA AGCTCGCCCT CACCTGTCGC
ATCCTGTTCG ACGGCGGCCA CGACTCTGGC CTGGCCGGGC AGATCACTGC GCGTGCGCAG
GAACCTGGCA CCTACTACAC CCAACAACTG GGGCTTGGCT TCGACGAAAT CGCTGCCTCC
AACCTGCTGG TGGTGGACGA AGACCTGACG GTGCTGCAAG GCCGTGGCAT GGCCAACCCG
GCCAACCGCT TCCACAGCTG GCTGTACCGC GCCCGCCCCG ACGTCAACTG CATCATCCAC
ACCCACCCGC TGCACAGCGC CGCCTTGTCG ATGCTGGAAG TTCCGCTGGC CATCTCGCAC
ATGGACCTGT GCCCACTGTT CGACGACTGT GCATTCCTCA AGGAATGGCC CGGTGTGCCG
GTGGGCAACG AAGAAGGCGA AATCATCGCG AACGCGATTG GCGACAAGCG CGCAATCCTG
CTTTCCCATC ATGGCCTGCT GATCGCTGGG CGTTCGATCG AGGAAGCCTG CGTGCTCGCC
CTGCTGTTCG AGCGGGCAGC AAAGATGCAA CTGCTGGCCA TGGGCGCCGG TGACATCCGC
CCCATCCCCG AAGCACTGGG CAAAGAGGCC CACGACTGGA TTTCCACCCC CAAACGTCAC
GGTGCTGCCT TCAGCTACTA CGCGCGCCGT GCCTTGCGTG CCCATGGCGA CTGCCTGGGC
TGA
 
Protein sequence
MTTTMHTPKD QLVKLAQQQM LTALTDNTYT VRQKLALTCR ILFDGGHDSG LAGQITARAQ 
EPGTYYTQQL GLGFDEIAAS NLLVVDEDLT VLQGRGMANP ANRFHSWLYR ARPDVNCIIH
THPLHSAALS MLEVPLAISH MDLCPLFDDC AFLKEWPGVP VGNEEGEIIA NAIGDKRAIL
LSHHGLLIAG RSIEEACVLA LLFERAAKMQ LLAMGAGDIR PIPEALGKEA HDWISTPKRH
GAAFSYYARR ALRAHGDCLG