Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3700 |
Symbol | |
ID | 5193365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4142422 |
End bp | 4144275 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640588156 |
Product | hypothetical protein |
Protein accession | YP_001269008 |
Protein GI | 148548906 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0576544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCTC GTATTTTCGG TCGCTCGGGA CCGTTGTCGG TACTTGCCTC ATCAGTACTT TTTTCTGCGT CTGCCTGTGC CGCTCAGTTT CACTGGGGTG AACTTGAGGG GCAATTCGAT TCGGCGCTTT CCTTTGGTAC CAGCATTGCG ACTGCCAACC CTGACCCGGC CCTGCACAAC AGCGCCAACA GCGATGACGG CCGCCTGAAC TTTGCCTCTG GCGATGTGTT TTCAGCGGTG TTCAAAGGCA CCCATGACCT GGAGCTCAAG CACGATAACC TGGGGGTGTT CCTTCGCGGT ACCTACTGGT ACGACACGGC CCTGCGTGAT CACGATCAGC GCTTCAAGCA GGTCGATGAC AATAACCGCA AGCGTTCGGC CAAGACCGCA GGTAGCCAGC TGCTCGATGC CTTCGGTTAC TACCTGTATG ACATCGACGG CCAGCCGGGC TCGCTCAGGT TGGGCAAGCA GGTGGTCAAC TGGGGTGAGA GCACCTTCAT CCAGGGCGGA CTGAACGTCA TCAACCCCGT CAACCTGGCG GCCTTGCGCC GCCCCGGCTC GGAAGTGAAG GACGCGCTGG TGCCGGTGAA CCTGTTCTAC TTCACCCAGA ACCTTACCGA AGCGCTGTCG GTCGACGGTT TCTATCAGCT GGACTGGGAA CAGACCCAGC TCGACAACTG CGGCACGTTC TTTTCGAACA ACGACTTTTT GCCCGATGGG TGTGATGGCC TGGACGTGGG CGCCAAATTG CTCGGCAACC CCACAGCCGT GACCGGGCTT GCGCCGTTCG GTGTGAACCT CACCCGCGAA GGCGTGCGCA TACCTCGCGG CAGCGACCAG GATGCCCGCA ACAGCGGGCA GTGGGGCGTT TCGCTGCGCT GGTACGTGGC GGCGCTGGAC ACCGAGTTTG GTGCTTACGC GGCGAACTAC CACAGCCGCA CGCCTTACCT GGGTACGGTC AGCAGCCCGT ATTTCGACAA CCGCCGTTTC GCCCCGCAGT TGTGCGCCAA CCTCGCTATC GGGCTTGCAG ACTGTGCCGC TTTTCTGGGT TCCAGCGCAG GCCAGTCGCT GGTCGGCGCG CTACGCCTGG GCACCTCGCA GTACCGGGTG CAATACCCCG AGGACATTCG CCTCTACGGC CTTTCGTTCT CCACTACCCT GCGCACCGGC ACGGCGCTGC AGGGGGAGCT GAGCTACCGG CCGAACATGC CCATGCAGCT CAACGGTACC GACATCATCC AGTCGTTGTT GAACGTCGAT GGCCGCTCGC CCTTGCTGGG TGACGGCCTG CGGCCAGACA GCGCCAGTAC GCTGTTCGAC GGCTACCGCC GTAAAGAGAT GACCCAGTTG CAGGTAACCG CTGTTCACGC TTTCAGCCAG GTGATGGGGG CCAACCAGTT GCTGTTGATA GGCGAGGCTG GCGCCACCTA CGTGGGCGGT CTGGAGGGCG CCTATGGCCC CCGTTACGGG CGCTCGGGCA CGTTCAACAG CGGCGAACTG GCGGACAACA GCGTGTGCGT GGCCATTTCC AAAACCCCTG AGCATTGCAA CGACGAAGGC TTCATGACCC CGTTTTCCTG GGGCTACCGG CTGCGTGCCA CCTGGGCCTA CCCCAACGTG ATTGCCGGTT TCGACCTGCG GCCGAACCTG TCCTGGGCAC ATGACGTGCA CGGCACCGGC CCGGTGGAGG GGTCGGCGTT CAGCGAAGGC TCCAGGGCCA TCAGTGTCGG GTTGGATGCG ACGCTCGCCA GCACCTACAG CCTGAGTGTG TCGTACACCG ACTTTATCGA CGGCGACTAT GGCACCCGCG GCGACCGGGA CTTCATCTCG CTGAGCCTGG GCGTCACTTT CTGA
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Protein sequence | MASRIFGRSG PLSVLASSVL FSASACAAQF HWGELEGQFD SALSFGTSIA TANPDPALHN SANSDDGRLN FASGDVFSAV FKGTHDLELK HDNLGVFLRG TYWYDTALRD HDQRFKQVDD NNRKRSAKTA GSQLLDAFGY YLYDIDGQPG SLRLGKQVVN WGESTFIQGG LNVINPVNLA ALRRPGSEVK DALVPVNLFY FTQNLTEALS VDGFYQLDWE QTQLDNCGTF FSNNDFLPDG CDGLDVGAKL LGNPTAVTGL APFGVNLTRE GVRIPRGSDQ DARNSGQWGV SLRWYVAALD TEFGAYAANY HSRTPYLGTV SSPYFDNRRF APQLCANLAI GLADCAAFLG SSAGQSLVGA LRLGTSQYRV QYPEDIRLYG LSFSTTLRTG TALQGELSYR PNMPMQLNGT DIIQSLLNVD GRSPLLGDGL RPDSASTLFD GYRRKEMTQL QVTAVHAFSQ VMGANQLLLI GEAGATYVGG LEGAYGPRYG RSGTFNSGEL ADNSVCVAIS KTPEHCNDEG FMTPFSWGYR LRATWAYPNV IAGFDLRPNL SWAHDVHGTG PVEGSAFSEG SRAISVGLDA TLASTYSLSV SYTDFIDGDY GTRGDRDFIS LSLGVTF
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