Gene Pput_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3700 
Symbol 
ID5193365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4142422 
End bp4144275 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content62% 
IMG OID640588156 
Producthypothetical protein 
Protein accessionYP_001269008 
Protein GI148548906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0576544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTC GTATTTTCGG TCGCTCGGGA CCGTTGTCGG TACTTGCCTC ATCAGTACTT 
TTTTCTGCGT CTGCCTGTGC CGCTCAGTTT CACTGGGGTG AACTTGAGGG GCAATTCGAT
TCGGCGCTTT CCTTTGGTAC CAGCATTGCG ACTGCCAACC CTGACCCGGC CCTGCACAAC
AGCGCCAACA GCGATGACGG CCGCCTGAAC TTTGCCTCTG GCGATGTGTT TTCAGCGGTG
TTCAAAGGCA CCCATGACCT GGAGCTCAAG CACGATAACC TGGGGGTGTT CCTTCGCGGT
ACCTACTGGT ACGACACGGC CCTGCGTGAT CACGATCAGC GCTTCAAGCA GGTCGATGAC
AATAACCGCA AGCGTTCGGC CAAGACCGCA GGTAGCCAGC TGCTCGATGC CTTCGGTTAC
TACCTGTATG ACATCGACGG CCAGCCGGGC TCGCTCAGGT TGGGCAAGCA GGTGGTCAAC
TGGGGTGAGA GCACCTTCAT CCAGGGCGGA CTGAACGTCA TCAACCCCGT CAACCTGGCG
GCCTTGCGCC GCCCCGGCTC GGAAGTGAAG GACGCGCTGG TGCCGGTGAA CCTGTTCTAC
TTCACCCAGA ACCTTACCGA AGCGCTGTCG GTCGACGGTT TCTATCAGCT GGACTGGGAA
CAGACCCAGC TCGACAACTG CGGCACGTTC TTTTCGAACA ACGACTTTTT GCCCGATGGG
TGTGATGGCC TGGACGTGGG CGCCAAATTG CTCGGCAACC CCACAGCCGT GACCGGGCTT
GCGCCGTTCG GTGTGAACCT CACCCGCGAA GGCGTGCGCA TACCTCGCGG CAGCGACCAG
GATGCCCGCA ACAGCGGGCA GTGGGGCGTT TCGCTGCGCT GGTACGTGGC GGCGCTGGAC
ACCGAGTTTG GTGCTTACGC GGCGAACTAC CACAGCCGCA CGCCTTACCT GGGTACGGTC
AGCAGCCCGT ATTTCGACAA CCGCCGTTTC GCCCCGCAGT TGTGCGCCAA CCTCGCTATC
GGGCTTGCAG ACTGTGCCGC TTTTCTGGGT TCCAGCGCAG GCCAGTCGCT GGTCGGCGCG
CTACGCCTGG GCACCTCGCA GTACCGGGTG CAATACCCCG AGGACATTCG CCTCTACGGC
CTTTCGTTCT CCACTACCCT GCGCACCGGC ACGGCGCTGC AGGGGGAGCT GAGCTACCGG
CCGAACATGC CCATGCAGCT CAACGGTACC GACATCATCC AGTCGTTGTT GAACGTCGAT
GGCCGCTCGC CCTTGCTGGG TGACGGCCTG CGGCCAGACA GCGCCAGTAC GCTGTTCGAC
GGCTACCGCC GTAAAGAGAT GACCCAGTTG CAGGTAACCG CTGTTCACGC TTTCAGCCAG
GTGATGGGGG CCAACCAGTT GCTGTTGATA GGCGAGGCTG GCGCCACCTA CGTGGGCGGT
CTGGAGGGCG CCTATGGCCC CCGTTACGGG CGCTCGGGCA CGTTCAACAG CGGCGAACTG
GCGGACAACA GCGTGTGCGT GGCCATTTCC AAAACCCCTG AGCATTGCAA CGACGAAGGC
TTCATGACCC CGTTTTCCTG GGGCTACCGG CTGCGTGCCA CCTGGGCCTA CCCCAACGTG
ATTGCCGGTT TCGACCTGCG GCCGAACCTG TCCTGGGCAC ATGACGTGCA CGGCACCGGC
CCGGTGGAGG GGTCGGCGTT CAGCGAAGGC TCCAGGGCCA TCAGTGTCGG GTTGGATGCG
ACGCTCGCCA GCACCTACAG CCTGAGTGTG TCGTACACCG ACTTTATCGA CGGCGACTAT
GGCACCCGCG GCGACCGGGA CTTCATCTCG CTGAGCCTGG GCGTCACTTT CTGA
 
Protein sequence
MASRIFGRSG PLSVLASSVL FSASACAAQF HWGELEGQFD SALSFGTSIA TANPDPALHN 
SANSDDGRLN FASGDVFSAV FKGTHDLELK HDNLGVFLRG TYWYDTALRD HDQRFKQVDD
NNRKRSAKTA GSQLLDAFGY YLYDIDGQPG SLRLGKQVVN WGESTFIQGG LNVINPVNLA
ALRRPGSEVK DALVPVNLFY FTQNLTEALS VDGFYQLDWE QTQLDNCGTF FSNNDFLPDG
CDGLDVGAKL LGNPTAVTGL APFGVNLTRE GVRIPRGSDQ DARNSGQWGV SLRWYVAALD
TEFGAYAANY HSRTPYLGTV SSPYFDNRRF APQLCANLAI GLADCAAFLG SSAGQSLVGA
LRLGTSQYRV QYPEDIRLYG LSFSTTLRTG TALQGELSYR PNMPMQLNGT DIIQSLLNVD
GRSPLLGDGL RPDSASTLFD GYRRKEMTQL QVTAVHAFSQ VMGANQLLLI GEAGATYVGG
LEGAYGPRYG RSGTFNSGEL ADNSVCVAIS KTPEHCNDEG FMTPFSWGYR LRATWAYPNV
IAGFDLRPNL SWAHDVHGTG PVEGSAFSEG SRAISVGLDA TLASTYSLSV SYTDFIDGDY
GTRGDRDFIS LSLGVTF