Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3696 |
Symbol | |
ID | 5192680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4138427 |
End bp | 4140388 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640588152 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001269004 |
Protein GI | 148548902 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCTTTT CACTGTCGAT GCTGGCGCTT GCCCTGCTGG CCCCCCTTCC GAGCCTGGCC GCAACAGCGG CCAAGGATGC CACCCCGGCC ACCCAGGCCA GCAACCAGCA GTGGCTGCAA CGGTTGCCTT TCGAGGATCG CGTCGATTAC GAAACCGCCC GGCGTGGGCT GGTCGAGCGG TTTGACGGGC CAGTCGCGAC AGCCGATGGC AAGACCGTGT GGAACCTGGC CCAGTATGCT TTTCTGGAAC CGGCGCAATC CCCTGCCACG GTAAACCCGA GCTTGTGGCG CATCGCTCAG TTGAACAACA TCGCCGGACT GTTCAAGGTC ACCGAGGGCA TCTACCAGCT TCGCGGCCTG GACCTGGCCA ACATGACCAT CGTCGAGGGG AAGGACGGGC TGATTGTGCT TGACCCGCTG CTTGCCGTGG AGACTGCCAA GGCGGGCCTC GAACTGTACT TCAAGCACCG CCCGCGCAAG CCGGTGACCA CGGTGATCTA CACCCACCCG CACGTCGACC ATTTCGGCGG CGTGCGCGGG GTGATCAACG AGGCGGACGT CAAGGCTGGC AAAGTCCAGG TCATCGCGCC CGAGGGGTTC TTCGAACATG CCATCGGCGA AAACGTGCTG GCCGGACCGG CCATGAAACG CCGCGCCCAG TACATGTACG GCGCCCCCCT GCCCCGTGGG CCGCGAGGCC AGGTGGATGC CGGACTGGGC AAGGGCGTGC CGGCCAATGC CACTGTCAGC CTCATCGCGC CGACGCTCGA AATCAGCCAA CCGCTGCAAC GCATGACCCT GAGCGGCGTG GAGGTGGAGT TCCAGCTGAC CCCGGGCACC GAGGCGCCGG CGGAAATGAA CATTTATTTC CCGGTGCTCA GGGCACTGTG CATGGCCGAG AACGCCACCC ATGTGCAGCA CAACGTACTG ACGCTGCGCG GGGCACTGGT GCGCGATCCG AAAGTGTGGG CCCATTACCT GGACCAATCG CTGGCGCGCT ATGGCGACCA GGCCGAGGTG GTGTTCGCCC AGCATCACTG GCCCACTTGG GGCGGCGCGG CCATCCGCGA CTACCTGGCC GACCAGCGCG ATATGTATGC CTTCATCGAC AGCCAGACCT TGCGCCTGAT CAATCAGGGC CAGACGCCCA TGGAAATTGC CCAGACCTTG GCCAGCCTGC CGCCGCGCCT GGCAAGCAAA TGGTACAGCC GCGACTACTA CGGCTCGCTC AGCCATAACG TCAGGGCCGT CTATCAACGC TATATGGGGT TCTACGACGG CAACCCGGCC AACCTCGACC CATTGCCACC GCAAGCGGCC GGCAAGCGTT ACGTGGCGGC GATGGGAGGT GCCGATCAGG TGCTGACCCA GGCCCGCCAG GCCTTCGCCG AGGGCGACTA TCGCTGGGTG GCGCAATTGG TCAACCACCT GGTATTCGCC GAGCCAGACA ACACCGAGGC CCGCGAACTG CAGGCCGACG CGCTGGAGCA ACTGGGTTAC CAGAGTGAGA ACGCCACCTG GCGCAATGCC TACCTCAGTG GCGCGCAGGA ATTGCGCTCA GGCGTTGCCA CCGGTGCGGG TAGCGGCGGC AACGCCGATG ACATGGTGCG GGCCCTGACA CCCAGCCTGT TTTTCGACTA TCTGGGCGTG CGGGTGAATG CCTACAAGGC TGCCGATAGC GACCTGACCA TCAACTGGCG GTTTTCCGAC CTGGACGAAG ACTACGCGCT CACCCTGCGC AACGGCGTCC TCACCCACCG CGACCTGGCG CGCCACGCCA AGGCCGATGT AGAGGTGACC ATGCGCAAGC AGACGCTGGA CAGCATTGCC TTGAAGCAGA CAGGCTTTCT CAAGGAAGCC ACAGCAGGGG CAATCGACAT CAAAGGCGAG CGGGTAAAGT TCCTGCAATT CATGGGCGGG CTGGAAGAGG CTGATTCACG CTTCAATCTC GTCACGCCCT GA
|
Protein sequence | MRFSLSMLAL ALLAPLPSLA ATAAKDATPA TQASNQQWLQ RLPFEDRVDY ETARRGLVER FDGPVATADG KTVWNLAQYA FLEPAQSPAT VNPSLWRIAQ LNNIAGLFKV TEGIYQLRGL DLANMTIVEG KDGLIVLDPL LAVETAKAGL ELYFKHRPRK PVTTVIYTHP HVDHFGGVRG VINEADVKAG KVQVIAPEGF FEHAIGENVL AGPAMKRRAQ YMYGAPLPRG PRGQVDAGLG KGVPANATVS LIAPTLEISQ PLQRMTLSGV EVEFQLTPGT EAPAEMNIYF PVLRALCMAE NATHVQHNVL TLRGALVRDP KVWAHYLDQS LARYGDQAEV VFAQHHWPTW GGAAIRDYLA DQRDMYAFID SQTLRLINQG QTPMEIAQTL ASLPPRLASK WYSRDYYGSL SHNVRAVYQR YMGFYDGNPA NLDPLPPQAA GKRYVAAMGG ADQVLTQARQ AFAEGDYRWV AQLVNHLVFA EPDNTEAREL QADALEQLGY QSENATWRNA YLSGAQELRS GVATGAGSGG NADDMVRALT PSLFFDYLGV RVNAYKAADS DLTINWRFSD LDEDYALTLR NGVLTHRDLA RHAKADVEVT MRKQTLDSIA LKQTGFLKEA TAGAIDIKGE RVKFLQFMGG LEEADSRFNL VTP
|
| |