Gene Pput_3696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3696 
Symbol 
ID5192680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4138427 
End bp4140388 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content64% 
IMG OID640588152 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001269004 
Protein GI148548902 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2015] Alkyl sulfatase and related hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTT CACTGTCGAT GCTGGCGCTT GCCCTGCTGG CCCCCCTTCC GAGCCTGGCC 
GCAACAGCGG CCAAGGATGC CACCCCGGCC ACCCAGGCCA GCAACCAGCA GTGGCTGCAA
CGGTTGCCTT TCGAGGATCG CGTCGATTAC GAAACCGCCC GGCGTGGGCT GGTCGAGCGG
TTTGACGGGC CAGTCGCGAC AGCCGATGGC AAGACCGTGT GGAACCTGGC CCAGTATGCT
TTTCTGGAAC CGGCGCAATC CCCTGCCACG GTAAACCCGA GCTTGTGGCG CATCGCTCAG
TTGAACAACA TCGCCGGACT GTTCAAGGTC ACCGAGGGCA TCTACCAGCT TCGCGGCCTG
GACCTGGCCA ACATGACCAT CGTCGAGGGG AAGGACGGGC TGATTGTGCT TGACCCGCTG
CTTGCCGTGG AGACTGCCAA GGCGGGCCTC GAACTGTACT TCAAGCACCG CCCGCGCAAG
CCGGTGACCA CGGTGATCTA CACCCACCCG CACGTCGACC ATTTCGGCGG CGTGCGCGGG
GTGATCAACG AGGCGGACGT CAAGGCTGGC AAAGTCCAGG TCATCGCGCC CGAGGGGTTC
TTCGAACATG CCATCGGCGA AAACGTGCTG GCCGGACCGG CCATGAAACG CCGCGCCCAG
TACATGTACG GCGCCCCCCT GCCCCGTGGG CCGCGAGGCC AGGTGGATGC CGGACTGGGC
AAGGGCGTGC CGGCCAATGC CACTGTCAGC CTCATCGCGC CGACGCTCGA AATCAGCCAA
CCGCTGCAAC GCATGACCCT GAGCGGCGTG GAGGTGGAGT TCCAGCTGAC CCCGGGCACC
GAGGCGCCGG CGGAAATGAA CATTTATTTC CCGGTGCTCA GGGCACTGTG CATGGCCGAG
AACGCCACCC ATGTGCAGCA CAACGTACTG ACGCTGCGCG GGGCACTGGT GCGCGATCCG
AAAGTGTGGG CCCATTACCT GGACCAATCG CTGGCGCGCT ATGGCGACCA GGCCGAGGTG
GTGTTCGCCC AGCATCACTG GCCCACTTGG GGCGGCGCGG CCATCCGCGA CTACCTGGCC
GACCAGCGCG ATATGTATGC CTTCATCGAC AGCCAGACCT TGCGCCTGAT CAATCAGGGC
CAGACGCCCA TGGAAATTGC CCAGACCTTG GCCAGCCTGC CGCCGCGCCT GGCAAGCAAA
TGGTACAGCC GCGACTACTA CGGCTCGCTC AGCCATAACG TCAGGGCCGT CTATCAACGC
TATATGGGGT TCTACGACGG CAACCCGGCC AACCTCGACC CATTGCCACC GCAAGCGGCC
GGCAAGCGTT ACGTGGCGGC GATGGGAGGT GCCGATCAGG TGCTGACCCA GGCCCGCCAG
GCCTTCGCCG AGGGCGACTA TCGCTGGGTG GCGCAATTGG TCAACCACCT GGTATTCGCC
GAGCCAGACA ACACCGAGGC CCGCGAACTG CAGGCCGACG CGCTGGAGCA ACTGGGTTAC
CAGAGTGAGA ACGCCACCTG GCGCAATGCC TACCTCAGTG GCGCGCAGGA ATTGCGCTCA
GGCGTTGCCA CCGGTGCGGG TAGCGGCGGC AACGCCGATG ACATGGTGCG GGCCCTGACA
CCCAGCCTGT TTTTCGACTA TCTGGGCGTG CGGGTGAATG CCTACAAGGC TGCCGATAGC
GACCTGACCA TCAACTGGCG GTTTTCCGAC CTGGACGAAG ACTACGCGCT CACCCTGCGC
AACGGCGTCC TCACCCACCG CGACCTGGCG CGCCACGCCA AGGCCGATGT AGAGGTGACC
ATGCGCAAGC AGACGCTGGA CAGCATTGCC TTGAAGCAGA CAGGCTTTCT CAAGGAAGCC
ACAGCAGGGG CAATCGACAT CAAAGGCGAG CGGGTAAAGT TCCTGCAATT CATGGGCGGG
CTGGAAGAGG CTGATTCACG CTTCAATCTC GTCACGCCCT GA
 
Protein sequence
MRFSLSMLAL ALLAPLPSLA ATAAKDATPA TQASNQQWLQ RLPFEDRVDY ETARRGLVER 
FDGPVATADG KTVWNLAQYA FLEPAQSPAT VNPSLWRIAQ LNNIAGLFKV TEGIYQLRGL
DLANMTIVEG KDGLIVLDPL LAVETAKAGL ELYFKHRPRK PVTTVIYTHP HVDHFGGVRG
VINEADVKAG KVQVIAPEGF FEHAIGENVL AGPAMKRRAQ YMYGAPLPRG PRGQVDAGLG
KGVPANATVS LIAPTLEISQ PLQRMTLSGV EVEFQLTPGT EAPAEMNIYF PVLRALCMAE
NATHVQHNVL TLRGALVRDP KVWAHYLDQS LARYGDQAEV VFAQHHWPTW GGAAIRDYLA
DQRDMYAFID SQTLRLINQG QTPMEIAQTL ASLPPRLASK WYSRDYYGSL SHNVRAVYQR
YMGFYDGNPA NLDPLPPQAA GKRYVAAMGG ADQVLTQARQ AFAEGDYRWV AQLVNHLVFA
EPDNTEAREL QADALEQLGY QSENATWRNA YLSGAQELRS GVATGAGSGG NADDMVRALT
PSLFFDYLGV RVNAYKAADS DLTINWRFSD LDEDYALTLR NGVLTHRDLA RHAKADVEVT
MRKQTLDSIA LKQTGFLKEA TAGAIDIKGE RVKFLQFMGG LEEADSRFNL VTP