Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3694 |
Symbol | |
ID | 5193865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4136079 |
End bp | 4137317 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640588150 |
Product | 3-hydroxybutyryl-CoA epimerase |
Protein accession | YP_001269002 |
Protein GI | 148548900 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATACTC CCTTCCCGAT CAATCAGGTG GCTGTGATAG GTGCAGGCAC CATGGGCCGC GGCATCGTCA TCAGCCTGGC CAACGCCGGG CTGTCGGTGC TGTGGCTGGA CTGCAACGCG GCAGCGCTCG AAGCCGGGCT GGGCATGGTC AGCCAGGCCT GGGCCCAGCA GGTGGACAAG CAGCGCATCA CCCCGGCCCA GGCCGACGCT TGCCTGGCGC GTGTGCAGGC AGTGGACGGC TATCCGGCGT TGGCGGAGGC CGACCTGGTG ATTGAAGCGG TGTATGAAAA CCTGGCGCTC AAGCAGGAAA TCTTCCGTGC ACTGGATGCA CACCTCAAGC CACGTGCGAT CCTGGCCAGC AACACCTCGG CGCTGGACAT CGACGCGATT GCCGCCGTCA CCCAGCGGCC GTCCCAGGTC CTGGGGCTGC ACTTCTTCAG CCCTGCGCAT GTCATGAAGC TGCTCGAAAT CGTGCGTGGG ACGCACACCG ATCAGAAGGT GCTCGATGCC GCCAAAGCGC TGGGCGAGCG CATGGGCAAG GTGGCGATAG TGGCAGGCAA CTGCCCTGGT TTCATTGGCA ATCGCATGTT GCGCAGCTAT GTGGGCGAAG CGCGCAAGTT GCTGCTTGAA GGGGCGTTGC CACATCAGGT GGATGCGGTA CTGCAGCAGT TCGGCTTCGC CATGGGGCCG TTCCGCATGT ACGACGTGGT GGGCATCGAC CTGGAGTGGC GCGCCCGGCA GTTGGCCGGG CAAGGCATGC ACGACCCGCT GGTGCAGGTC GATAATGCAC TGTGCGAGCT CGGCCGCCTT GGGCAGAAGA CCGGGCAGGG CTATTACCGC TATGCCCCCG GCAGCCGGCA GGCCGAGCAT GACCCGCAGG TCGACGCGTT GGTGCTGCAG GTGTCTCAGA ACCTTGGCTA CCGACGTCGG GGCATCAGTG CCGAGGAAAT CCTCGAACGG TGCCTGCTGG CACTGGTCAA CGAAGGGGCG AAGGTTCTCC AGGAAGGTAT CGCCGCCAGC AGCAGCGACA TCGACCGGGT CTGGCTCCAC GGCTATGGCT TCCCGGCTGC CACTGGCGGG CCCATGCGCT GGGCTGACGA GCAGGGGGCG CCGTTTATCC TGGCCCGGCT GGAATACCTG CAGGGCGTGC TTGGCGAGCA TTGGCGCCCG GCAGGGCTGC TCTACTCACT CGTGGCCGGT GGCAAGCGTT TCGAACCGCG CGGGGAGGTT CAGGCATGA
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Protein sequence | MNTPFPINQV AVIGAGTMGR GIVISLANAG LSVLWLDCNA AALEAGLGMV SQAWAQQVDK QRITPAQADA CLARVQAVDG YPALAEADLV IEAVYENLAL KQEIFRALDA HLKPRAILAS NTSALDIDAI AAVTQRPSQV LGLHFFSPAH VMKLLEIVRG THTDQKVLDA AKALGERMGK VAIVAGNCPG FIGNRMLRSY VGEARKLLLE GALPHQVDAV LQQFGFAMGP FRMYDVVGID LEWRARQLAG QGMHDPLVQV DNALCELGRL GQKTGQGYYR YAPGSRQAEH DPQVDALVLQ VSQNLGYRRR GISAEEILER CLLALVNEGA KVLQEGIAAS SSDIDRVWLH GYGFPAATGG PMRWADEQGA PFILARLEYL QGVLGEHWRP AGLLYSLVAG GKRFEPRGEV QA
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