Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3685 |
Symbol | |
ID | 5192145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4125511 |
End bp | 4126623 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640588141 |
Product | hypothetical protein |
Protein accession | YP_001268993 |
Protein GI | 148548891 |
COG category | [S] Function unknown |
COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTCCA TTGATCAACA AGAGTGCGAA ATCATGCAAC GAATTCCTTG CGTACTCATG CGCGGCGGTA CCTCCAAAGG GCCGTTCTTC CACGCCTGGG ACCTGCCTGC CAATGTGGTC GAGCGCGACG AGTTGCTGAT CAACCTCATG GGCTCTGGCC ATGAGCTGGA AATCGACGGC ATCGGTGGCG GCAGCCCGCA GACCAGCAAG GTGGCGATCA TCAGCCCGTC ATTGCACGCC GACGCCGACG TCGACTACCT GTTCGTGCAG GTGATGGTCG CACAGCGCCG GGTCGATACG GCCCCCAACT GCGGCAACAT GCTGTGTGCG GTTGGGCCGT TCGCCATCGA ACAGGGGTTG GTAAAAGGCC AGGAAGGCAA GACCTTGGTG CGCATCCGTA ACCTCAACAC TGGCACCTTC GTCAATTCGT TGGTCGAAAC GCCCGGCGGT ATCGTGCGCT ACGAAGGCCG TACGGCGATC GATGGGGTGC CGGGCACTGC CGCCCCGGTG CACCTGACCT TCCTCGACGC GGTCGGCAGC AAGACCGGCA AGCTGTTCCC CACGGGCAAG GCCCAGGACG TGATTGATGG CGTGCCGGTG ACCTGCATCG ACATGGCCAT GCCGATGATG GTAGTGGAGG CCAGCCAGGT GGGGGTCAGC GGCTCGGAAA CCCCGGCTCA GCTGGACGCC GACAGCGCGC TGCTCGAACG CCTGGAAGCG TTGCGGCTGA AGGCCGGAAA GGCCATGGGC CTGGGCGATG TCAGTGGCAT GGTCATCCCC AAGCCAGTGC TGGTGTCCAA GCCGCGCTAC GACGGCACGC TGCAGGTTCG CTATTTCATG CCGCACAACT GCCATCGTGC CTTGGCGATC ACGGGAGCCG TGGGGCTGGC GACTGCCTGC GTCAGCCCTG GCACCGTGAT TGCCGACCTG TTGGGCGAAG GCGCGCAGCA ACTGGCCGAG GTCCGCCTGG AGCACCCAAG TGGCGGCATC GATGTTGCGC TGACGCGCAG CGGTGCCGAG GGCCAGACGA TCCAGGCTTC GGTGGTGCGA ACCGCCCGGC GGCTCTTCTC AGGGTTCGTC TACGCCCCTA CATTCCGCAG GTTGGCCGGG TAG
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Protein sequence | MMSIDQQECE IMQRIPCVLM RGGTSKGPFF HAWDLPANVV ERDELLINLM GSGHELEIDG IGGGSPQTSK VAIISPSLHA DADVDYLFVQ VMVAQRRVDT APNCGNMLCA VGPFAIEQGL VKGQEGKTLV RIRNLNTGTF VNSLVETPGG IVRYEGRTAI DGVPGTAAPV HLTFLDAVGS KTGKLFPTGK AQDVIDGVPV TCIDMAMPMM VVEASQVGVS GSETPAQLDA DSALLERLEA LRLKAGKAMG LGDVSGMVIP KPVLVSKPRY DGTLQVRYFM PHNCHRALAI TGAVGLATAC VSPGTVIADL LGEGAQQLAE VRLEHPSGGI DVALTRSGAE GQTIQASVVR TARRLFSGFV YAPTFRRLAG
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