| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3673 |
|---|
| Symbol | |
|---|
| ID | 5195052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 4110263 |
|---|
| End bp | 4110973 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640588129 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001268981 |
|---|
| Protein GI | 148548879 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCAC TGGAAATGGA CTACGGACAC GGCGATGAAG TGGCCAGCCA CTGCCACGCC
GAAGACCAGC TGATTTACGC CGCCAGCGGC GTGATGCGGG TCAGCAGCGA GGGCGGCAGC
TGGGTGATCC CCGGCGGGCA TGCCTTGTGG ATGCCTGCGG GGGTCAGCCA TGCCATCCGC
ATGGAGGGCG TGGTCTACCT GCGCACCTTG CTGCTCGATG CCCACATCGA ACGCTGCCAG
GTCATCGTCG TGTCCGGCCT GCTGCGCGAA CTGATCCTGG CGGCGTCACG GGTGCTGAAC
CTGCGCGACG GCGCGCATGC TCGTGCGCTG ATCTTGTTCG AACTCGCCGC CGCCCGGCGC
ATCGATGCCT TCGTCCCTAC GCCGCAGCAC GCACGCCTGC GTGCCTGGTG CGAGCGCTTC
CTGCAGGACC CGGCCCAGGA CCTGACCCTG GAGCAATGCG GCGCACAACT GAACATGAGT
GCCCGCAGTG TGGCCAGGCT GTTCCAGCGC GAGGTGGGCA TGTCGTATGG CCAATGGCGC
GCCCGTGCCC GGGTGATGCT CAGCCAGCAG TGCCTGGCCG ATGGCAAGCC GATCCTGAAC
GTTGCGCTGG AGCACGGCTA TCAGAGCGCC AGCGCATTTA CTGCCATGTT CAAGCGCATC
CTCGGCCATG CACCGAGTGA TTGGCAAAAC GGTACCGCGC GCGAGCACTG A
|
|---|
| Protein sequence | MQALEMDYGH GDEVASHCHA EDQLIYAASG VMRVSSEGGS WVIPGGHALW MPAGVSHAIR
MEGVVYLRTL LLDAHIERCQ VIVVSGLLRE LILAASRVLN LRDGAHARAL ILFELAAARR
IDAFVPTPQH ARLRAWCERF LQDPAQDLTL EQCGAQLNMS ARSVARLFQR EVGMSYGQWR
ARARVMLSQQ CLADGKPILN VALEHGYQSA SAFTAMFKRI LGHAPSDWQN GTAREH
|
|---|
| |