| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3671 |
|---|
| Symbol | |
|---|
| ID | 5191527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 4108774 |
|---|
| End bp | 4109598 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640588127 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001268979 |
|---|
| Protein GI | 148548877 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTA AAGCGAAGCC CCTACCGCCG TCCGACTGGG TCATCCGTAG TGCCCAACCG
GGCGGTATCG AGCGTATCGA AGCCTGGTTC GGTAGCCACG GCTACGACCC GCATCGCCAC
GATACCTATT CGATCGGCCG CACGCTGGCC GGCGTGCAAA GCTTCCACTA CAAGGGTTCG
CTGCGCCACG GCATACCGGG CAACACGCTG GTGTTGCACC CGGACGAACT GCATGACGGC
ATGGCCGGCA CCGACGCAGG CTTTCGCTAC CGCATGGCCT ACGTCGACCC GGCACTGATC
CAGAACGTGC TGGGTGGTCA GCCTTTGCCC TTCATCGCTG GTGGGCTGTC CAGCGACCCT
CGCCTGTACC ACGCCAGCGA AGCGTTCGTG CAGGCAGTGG ACCACGCGCT GGAGCCATTG
GAAGAACAGG ACGCCCTGTA TGACCTGGCG ATCGCCTTGC GGGCCGTCGG CGGCAAGCCG
CGCGGGCGCA AGCGCCTGGA TTACCAGGCA GCCGAACGCG CCCGGGCCTT CATCATGGAA
CACCTGCATG TGGGCATAAC ACTGGACATG CTGGAACAGG CCAGCGGCCG CGAACGCTGG
AGCCTGTCGC GTGACTTTCG CACGCTGTAC GGCACCAGCC CCTATCGCTT TGTCACCCTG
CGCCGCCTCG ACAGCTTTCG CCGAATGATC CTGGACGGCT TCACCTTGGT CGAGGCAGCC
CTTGCCGCAG GCTTTCATGA CCAGAGCCAC ATGACCCGGC ACTTCACCAG TTGCTACGGC
GTACCGCCCT TACGCTGGCT GGAGCGTTTG CGAGCGTCAC GCTGA
|
|---|
| Protein sequence | MARKAKPLPP SDWVIRSAQP GGIERIEAWF GSHGYDPHRH DTYSIGRTLA GVQSFHYKGS
LRHGIPGNTL VLHPDELHDG MAGTDAGFRY RMAYVDPALI QNVLGGQPLP FIAGGLSSDP
RLYHASEAFV QAVDHALEPL EEQDALYDLA IALRAVGGKP RGRKRLDYQA AERARAFIME
HLHVGITLDM LEQASGRERW SLSRDFRTLY GTSPYRFVTL RRLDSFRRMI LDGFTLVEAA
LAAGFHDQSH MTRHFTSCYG VPPLRWLERL RASR
|
|---|
| |