| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3666 |
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| Symbol | |
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| ID | 5192640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4100442 |
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| End bp | 4102928 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588122 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001268974 |
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| Protein GI | 148548872 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.476594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACACC TGCACCCTAC CCCAGCAACC AAGCTCAGCC AGGCCGTCCG CCTGGTGCTG
TTCGGCATGT CCCTGGCCAG CGCGCCCGGC CTGCTGCTGA TGCCTGCCCA GGCAATGGCC
CAAAGCCAGG CCACCTACCA TGTCCCCGCT GGCTCACTGG GCACCGCCAT CACCCAGTTT
GGCGTACAGG CGGGTGTGAC CATTTCGTTC GACACCGCAC AGACGCGCAA CCTCGACAGC
GCGGGCCTGG AAGGCAGCTT CAGTGTCGAG GAAGGTCTGG CGCGGCTGCT GGGCAACAGT
GGCCTGCAGG CGCAGCGTCA GGGCAATGGC GGCTATGTGC TGGTCCCTGC GCAAAACGGT
TCGGCCATGG AACTGGCGCC GATGAACATC GACGCCAACC GCCTGGATGC GACCAGCGAA
GGCTCCCAGT CCTACACCGC CCGTGCCATC ACCATCGGCA AGGGCGTACA CACGCTGAAA
GAAACCCCGC AGTCGGTCAC CGTGATGACC CGCAAGATGC TCGACGACCA GAACCTCAAC
ACACTGGAGC AGGTACTGGA CAAGACCCCG GGCATCACCG TGTATGACTC GCCCATGGGC
GGCAAGTATT TCTATTCCCG TGGTTTCAAC CTGGATGGCC AGTACCAGTA CGACGGCGTG
CCCTTGGACG TGGGCGGCAA CTACGTGCAG GCCAACAGCT TTTCCAGCGA CATGGCGTTC
TATGACCGCG TCGAGGTGCT TAAAGGTGCG GCCGGCATGA TGAAAGGCTC TGGCTCCTCC
GCCGGGGGCG TCAACTTCGT GCGCAAACGG GGGCAGGAAA AAGCCGCCAC CACCGTCACC
CTGTCAGCCG GCAGCTGGGA CAACTACCGC GGGCAAGTGG ACGTGGGCGG CCCGCTGAAC
GCGTCGGGCA CCGTGCGGGG GCGCGCCGTG GCGACGCTGC AGGACCGCCA GTACTTCTAT
GACACGGCCA AGCGCCAGGA CCAGATACTG TACGGCGCCA TCGACTGGGA CGTCACGGCC
GACACCACCG TGGGCTTTGG CCTGGCTTAC GAGGATGTCG ATGCCACCCC GTGCTACGCC
GGCCTGCCAC GCTACGCCGA TGGCAGTGAC CTGAAGCTGT CGCGCTCCAC CTGCCTGGGG
GCCAGCTGGA ACGACATGCA AAGCCAGCGT ATTACCGGCT TTGCCGACCT CAAGCACCGC
TTCAACGATG ACTGGACCCT GAACTTCGCC TCGATCTACA CCCACAACAC CCAGGACATC
GAATACGCTT ATTCCGAAGG CACGGTACCC GTCGGCGCCA GCACCGCCAG CATGAACGTC
CGGGCCGGCC GTTTCGACTA CGACCAGGAC GACTACGGCT CCGATAGCTA TGTCGATGGC
AAGTTCGAGG CGTTCGGCCT GCAGCACGAG CTGATCATGG GTGTCAACGC CAGCCGACAG
AAAACCCATG ATTACTTCGC GCTGATGCTG CTGGACGGCA AGCAGGACCC GTTCAACCCA
TCCGCGAACT TCACACACCC GTCCAAGGCC GATTACCTGG TCAACCCGAG CCGCGGTGGC
AGTGTGCCAA CCGATACCAC TACCACCCAG TACGGCACTT ACGCCAACCT GCGCCTGAAA
CTAGCAGAGC CACTGACCTT GGTGCTGGGC GCGCGGGTCA GCTGGTACCG TAACAAGAGC
GACTCCTATA CCCAGTTCTA CGATTACTGG GTGCATAATC GCAGCCAGGA AAACGGTCAG
GTCACGCCGT TTGCCGCCGT GCTGTACGAC CTGAACGAGC AGTGGACCGC CTATGCCAGC
TACGCCGACA TCTTCCAGCC ACAGAGCGAC AAGGTGAATG CCGAGCGGCA GGCGTTACAG
CCAAAGACCG GCGCCAACTA TGAAGTCGGC ATCAAGGGCG AGCTGCTCGA CGGCGCGTTG
AACACCTCCT TCAACCTGTT CCGCACTGTC GAGAATCACC GCGCAGAAAC GGACTACGTC
GATACCTGCC CCTCAGGCGA CGGGTATTGC TACAACGACA GCGGCAAGGT ACGCGCACAG
GGGTTCGAAG CCGAGATCAG CGGCTCGCCG ATCGAGCGGT TGCAGCTGTT GGCGGGCTAC
ACCTACACCC AGACGAAGTA CCTGAGTACC ATCGAAGACA CTGACCCGAC CGAACTGACC
TTCACCTCCA GCTTCATCCC ACGGCACATG CTCAAGGTAT GGGGTGACTA CCAGCTGGGC
GGTGCTCTGG AGCGCTGGAC CCTCGGCGCA GGCCTGAACA GCCAGAGCGA GAACTTCCGT
ACTACCGGCA CTACCCGTGT CGAGCAGGCG GGCTACACCG TGTGGAACGG CCGTGTGCAG
TACCGCCTCG ACCCGAACTG GACTGTCGCG CTCAACGGCA ACAACCTGTT CGACAAGAAG
TACTACGCCA CCATCGGCGC GCCGGCGTGG GGCAACTTCT ATGGTGAACC GCGCAATTTT
ATGGTGACAT TGCAAGGGGC GTTCTGA
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| Protein sequence | MPHLHPTPAT KLSQAVRLVL FGMSLASAPG LLLMPAQAMA QSQATYHVPA GSLGTAITQF
GVQAGVTISF DTAQTRNLDS AGLEGSFSVE EGLARLLGNS GLQAQRQGNG GYVLVPAQNG
SAMELAPMNI DANRLDATSE GSQSYTARAI TIGKGVHTLK ETPQSVTVMT RKMLDDQNLN
TLEQVLDKTP GITVYDSPMG GKYFYSRGFN LDGQYQYDGV PLDVGGNYVQ ANSFSSDMAF
YDRVEVLKGA AGMMKGSGSS AGGVNFVRKR GQEKAATTVT LSAGSWDNYR GQVDVGGPLN
ASGTVRGRAV ATLQDRQYFY DTAKRQDQIL YGAIDWDVTA DTTVGFGLAY EDVDATPCYA
GLPRYADGSD LKLSRSTCLG ASWNDMQSQR ITGFADLKHR FNDDWTLNFA SIYTHNTQDI
EYAYSEGTVP VGASTASMNV RAGRFDYDQD DYGSDSYVDG KFEAFGLQHE LIMGVNASRQ
KTHDYFALML LDGKQDPFNP SANFTHPSKA DYLVNPSRGG SVPTDTTTTQ YGTYANLRLK
LAEPLTLVLG ARVSWYRNKS DSYTQFYDYW VHNRSQENGQ VTPFAAVLYD LNEQWTAYAS
YADIFQPQSD KVNAERQALQ PKTGANYEVG IKGELLDGAL NTSFNLFRTV ENHRAETDYV
DTCPSGDGYC YNDSGKVRAQ GFEAEISGSP IERLQLLAGY TYTQTKYLST IEDTDPTELT
FTSSFIPRHM LKVWGDYQLG GALERWTLGA GLNSQSENFR TTGTTRVEQA GYTVWNGRVQ
YRLDPNWTVA LNGNNLFDKK YYATIGAPAW GNFYGEPRNF MVTLQGAF
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