| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3663 |
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| Symbol | |
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| ID | 5194427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4097430 |
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| End bp | 4098662 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588119 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001268971 |
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| Protein GI | 148548869 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.555835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.514134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC CCTTCACTCT TCTGGCCGAG GCGGTTCGCC AGCACGGCTC GCCGCTTTGG
GCGTACGACG CCAGCACCAT CGCCGAGCGT GTCGAGCAGT TGAACGTATT CGACACCGTG
CGCTTCGCCC AGAAAGCCAA CCCCAACCTG CATGTGTTGC GCCTGATGCG CGCCCATGGC
CTGGTGCTGG ACGCCGTGTC GCTGGGTGAG ATGGAACGGG CCTTCGCCGC CGGCGCGAGC
GTTGACGGTG ACCCTGCCGG CGTGGTGCTG ACCTGCGACG CGCTGGACCG CCCCACCCTG
GAGCGCGTGG TGGCGTCAAA GATCGAAGTC AATGCCGGCT CCATTGACAT GCTGCGCCAA
CTGGGTGAAC GCTCGCCCGG CCACCGCGTG TGGATCCGCA TCAACCCGGG CTTCGGCCAT
GGTCACAGCC GCAAGACCAA TACCGGCGGC GAAAACAGCA AGCATGGCAT CTGGCACGAA
GAGCTGGACG AGGCGCTGGC GTGCATCAAG GCCCATGGCC TGCACCTGGT GGGCGTGCAC
ATGCACATTG GTTCCGGGGT GGACTACCAG CACCTGGAAC AGGTGGCCCG CTCGATGATC
GAGCTGATCG ACCGCCTGGG CGTGGACATC GAGGCGTTCT CCATCGGTGG CGGGCTGTCC
ACGCCTTACC GCAGCACCGA CAAACCGGTC GACCTGCAGC GTTATGCGCA GACCTGGGCG
GTGGCGCGCA AGGAGATCGA AGCGATGCTC GGCCACCCGG TGCGCATGGA GATCGAACCC
GGGCGCTTCC TGGTGGCGGA GTCGGGCTAC CTGGTGGCCG AAGTCCGTGC CGTGAAACAG
GTGGGGCGCA ATACCTTCGT CATGATCGAT GCCGGCTTCA ACGACCTGAT GCGCCCGGCG
ATGTACGGCG CCTACCACGG CATGACCCTG CTCGATGCCG ATGGCCAGGC AGTAGATCGC
CCGCGCCAGC CGACCGTGGT GGCCGGGCCG TTGTGTGAAT CGGGTGACGT GTTCACTCAG
GATGACCAGG CGCTGACCCC GCAGGACCTG CCTCAGGCAC AGGTGGGCGA CCTGCTGGTG
ATCCACGATG CCGGGGCCTA TGGCGCGTCG ATGTCGTCGA ACTACAACAG CCGGCCGCTG
CTGCCGGAGT TCCTGATCGA GAACGGTGCC CTGCGGATGA TCCGCCGGCG CCAGACGGTG
CAGGACCTGC TGAGCCTGGA GGCCGGGTTC TAA
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| Protein sequence | MTAPFTLLAE AVRQHGSPLW AYDASTIAER VEQLNVFDTV RFAQKANPNL HVLRLMRAHG
LVLDAVSLGE MERAFAAGAS VDGDPAGVVL TCDALDRPTL ERVVASKIEV NAGSIDMLRQ
LGERSPGHRV WIRINPGFGH GHSRKTNTGG ENSKHGIWHE ELDEALACIK AHGLHLVGVH
MHIGSGVDYQ HLEQVARSMI ELIDRLGVDI EAFSIGGGLS TPYRSTDKPV DLQRYAQTWA
VARKEIEAML GHPVRMEIEP GRFLVAESGY LVAEVRAVKQ VGRNTFVMID AGFNDLMRPA
MYGAYHGMTL LDADGQAVDR PRQPTVVAGP LCESGDVFTQ DDQALTPQDL PQAQVGDLLV
IHDAGAYGAS MSSNYNSRPL LPEFLIENGA LRMIRRRQTV QDLLSLEAGF
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