| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3660 |
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| Symbol | |
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| ID | 5191593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4090708 |
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| End bp | 4095573 |
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| Gene Length | 4866 bp |
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| Protein Length | 1621 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588116 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_001268968 |
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| Protein GI | 148548866 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.89214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.99848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTCT TCACCGCAGC CAGCAAAGCC GACTTCCAGC ATCAACTGCA AGCGGCCCTG
GCGCAGCACA TCAGCGAGCA GTCCCTGCCA CAAGTGGCGC TGTTCGCCGA GCAGTTCTTC
GGCATCATCT CTCTGGACGA ACTCACCCAG CGCAGGCTTT CCGACCTGGC CGGCTGCACC
CTGTCAGCCT GGCGCATCAT CGAGCGTTTC GACCCCGAAT ACCCGCAAGT GCGGGTGTAC
AACCCTGATT ACGAACGTAA TGGCTGGCAG TCGACCCATA CCGTGGTCGA AGTGTTGCAC
CATGACTTGC CGTTCCTGGT CGACTCGGTG CGCACCGAGC TCAACCGCCG TGGCTACAGC
ATTCACACCC TGCAAACCAC CGTGCTCAGC GTGCGCCGTG GCGCCAAGGG CGAGCTGTTG
GAGCTGCTGC CCAAGGGCAC CCAGGGCGAA GGCGTGCGCT ACGAGTCACT GATGTACCTG
GAGATCGACC GCTGCGCCAA TGCCGCCGAG CTGACAGTGC TGACCCGCGA GATCGAGCAG
GTGCTGGCCG AGGTACGGGT GGTGGTGGCC GACTTCGAAC CGATGAAGGC CAAGCTGCGT
GAAGTGGTAG CGCAGGTGGA ACAGACCGGC TTTGGTCCTG CCCAAAACGA GAAGGGCGAA
GTCAAGGCCT TCCTCGAGTG GCTGCTGGAT AACCACTTCA CCTTCCTGGG CTATGAAGAA
TTCACCGTCA AGGGCGACGC CGATGGCGGC CAGATGGTCT ACGACGAGCA GTCGTTCCTC
GGTCTGCCGC GCCGTCTGCG CGTGGGCCTG ACCGCAGAAG AGCTGCGCAT CGAAGACTAC
GCTGTGGCCT ACCTCAACGA GCCGCTGCTG CTGTCGTTCG CCAAGGCCGC GCTGCCCAGC
CGCGTGCACC GCCCGGCCTA CCCGGACTAT GTGTCGATCC GCCAGCTGGA CGCCGACGGC
AAGGTCATCA AGGAGCACCG CTTCATGGGT CTGTACACCT CGTCGGTGTA TGGCGAAAGC
GTGCATGCCA TTCCGTACAT CCGCGTGAAG GTGGCCGAAG TCGAGCGCCG TTCGGGCTTC
GATCCCAAGG CCCACCTGGG CAAGGAACTG GCCCAGGTGC TGGAAGTGCT GCCGCGCGAC
GACCTGTTCC AGACGCCGAT CGACGAGCTG TTCAGCACGG TCATGGCAAT CGTGCAGATC
CAGGAGCGCA ACAAGATCCG CGTGTTCCTG CGCAAAGACC CGTATGGCCG CTTCTGCTAC
TGCCTGGCCT ACGTCCCGCG GGAAATCTAC TCCACCGAAG TGCGGCAGAA GATCCAGCAG
GTGCTGATGG AGCGCCTTAA GGCCAGCGAC TGCGAGTTCT GGACCTTCTT CTCCGAATCG
GTACTGGCCC GTGTGCAACT GATCCTGCGG GTCGACCCCA AGAACCGTAT CGACATCGAC
CCGCAGCAGC TGGAACGCGA AGTCATCCAG GCCTGCCGCT CGTGGCATGA CGACTACTCG
GCACTGGTGG TGGAGAACTT CGGCGAAGCC CAGGGCACCA ACATCCTCGC CGATTTCCCC
AAAGGCTTCC CGGCCGGTTA CCGCGAGCGC TTCGCCGCGC ACTCGGCGGT GGTCGATCTG
CAGCATGTGC TGAACCTGTC GGAAAACAAG CCGCTGGCCA TGAGCTTCTA CCAGCCGTTG
ACCCAGGTGG GCGAGCGCAT CCTGCACTGC AAGCTGTACC ACGCCGACAC CCCGCTGGCG
CTGTCCGACG TGCTGCCGAT TCTGGAAAAC CTCGGCCTGC GCGTGCTCGG CGAGTTCCCG
TACCGCCTGC GCCATGCCAA TGGCCGCGAA TACTGGATCC ACGACTTCGC CTTCACCTAC
AGCGAAGGCC TGAGCCTGGA TATCCAGCAG CTCAACGATA CCTTGCAGGA CGCCTTCATC
CACATCGTCC GGGGTGACGC CGAGAACGAC GCCTTCAACC GCCTGGTGCT CACCGCTGGC
CTGCCGTGGC GCGACGTGGC CTTGCTGCGT GCCTACGCCC GTTACCTGAA ACAGATCCGT
CTCGGCTTCG ATCTGGGCTA TATCGCCAGC ACCCTGAACA ACCACACCGA CATCGCCCGT
GAGCTGACCC GGTTGTTCAA GACCCGCTTC TACCTGGCGC GCAAGCTTAC CCAGGACGAC
CTTGACGACA AGCAGCAGCG CCTGGAACAG GCCATCCTGA GCGCCCTGGA TGACGTGCAG
GTGCTCAACG AAGACCGCAT CCTGCGGCGC TACCTGGACT TGATCAAGGC CACCCTGCGT
ACCAACTTCT ACCAGCCCGA CGCAAACGGC CAGAACAAGT CGTACTTCAG CTTCAAGTTC
AACCCCAAGC TGATCCCCGA ACTGCCCAAA CCGGTGCCAA AGTTCGAGAT ATTCGTCTAT
TCGCCACGGG TCGAGGGCGT GCACCTGCGC TTTGGCAACG TTGCCCGTGG TGGCCTGCGC
TGGTCCGACC GCGAAGAGGA CTTCCGTACC GAAGTGCTGG GGCTGGTGAA AGCCCAGCAG
GTGAAGAACT CGGTCATCGT GCCGGTCGGC GCCAAGGGTG GTTTCCTGCC GCGTCGCCTG
CCGCTGGGCG GCAGCCGTGA CGAGATTGCC GCCGAAGGCG TGGCGTGCTA CCGCATCTTC
ATTTCCGGCC TGCTCGACAT CACCGACAAC CTCAAGGACG GTGGCGTGGT GCCGCCGGCC
AACGTGGTGC GCCATGACGA TGACGACCCG TACCTGGTGG TAGCGGCCGA CAAAGGCACC
GCGACCTTCT CCGACATCGC CAACGGCATT GCCATCGACT ACGGCTTCTG GCTGGGCGAT
GCTTTTGCTT CCGGCGGCTC GGCCGGTTAT GACCACAAGA AGATGGGCAT TACCGCGCGC
GGTGCCTGGG TGGGCGTGCA GCGCCACTTC CGCGAGCGCG GCATCAACGT GCAGGAAGAC
CCGATCACCG TCATTGGTGT GGGCGATATG GCCGGCGACG TGTTCGGCAA TGGCCTGCTG
ATGTCCGACA AGCTGCAACT GGTGGCCGCG TTCAACCACC TGCATATCTT CATCGACCCC
AACCCGGAGC CCGCTTCCAG CTTCGCTGAA CGCAAGCGCC TGTTCGACCT GCCGCGCTCG
GCCTGGAGCG ACTACGACAC CAGCATCATG TCCGAAGGCG GCGGGATCTT CCCGCGCAGT
GCCAAGAGCA TCGCCATCAG CCCGCAGATG AAAGAGCGCT TCGCCATCGA AGCCGACCGC
CTGACCCCGA CCGAGTTGCT CAATGCGCTG CTCAAGGCCC CGGTAGACCT GCTGTGGAAC
GGTGGCATCG GGACCTATGT CAAGGCCAGT ACGGAGAGCC ACGCCGATGT CGGCGACAAG
GCCAACGATG CGCTGCGGGT CAACGGTAAC GAACTGCGCT GCAAGGTAGT GGGCGAGGGC
GGCAACCTGG GCATGACCCA GCTCGGCCGC GTCGAGTTCG GCCTGAACGG CGGCGCCACC
AACACCGACT TCATCGACAA CGCCGGCGGC GTGGACTGCT CCGACCACGA GGTCAACATC
AAGATCCTGC TCAACGAAGT GGTGCAGGGT GGCGACATGA CCGAGAAGCA GCGCAACCAG
CTGCTGGGCA GCATGACCGA CGAAGTCGCC GGGCTGGTAC TGGGCAACAA CTACAAGCAG
ACCCAGGCAT TGTCGCTGGC TGCCCGCCGC GCCCGCGAGC GGATTGCCGA GTACAAGCGC
CTGATGGCCG ACCTCGAGGC GCGGGGCAAG CTGGACCGTG CCATCGAATT CCTGCCGTCC
GAAGAGCAGT TGGCCGAACG CCTGGCTGCC GGCCACGGCC TGACCCGCGC CGAGCTGTCG
GTGCTGATCT CGTACAGCAA GATCGACCTC AAGGAGCAAC TGCTCAAATC GCTGGTGCCG
GACGACGACT ACCTGACCCG TGACATGGAA ACCGCTTTCC CGCCGTCCCT GGTCAGCAAG
TTCGCCGAGG CCATGCGCCG CCACCGCCTG AAGCGCGAAA TTGTCAGCAC CCAGATCGCC
AACGACCTGG TCAACAACAT GGGTATCACC TTCGTCCAGC GCCTGAAGGA GTCGACCGGC
ATGAGCCCGG CCAACGTGGC CGGTGCTTAC GTGATCGTGC GCGATATCTT CCACCTGCCG
CACTGGTTCC GCCAGATCGA GGCGCTGGAC TATCAGGTGC CGGCAGAAAT CCAGCTCACT
CTGATGGACG AGTTGATGCG ACTGGGCCGC CGTGCCACCC GTTGGTTCCT GCGTAGCCGC
CGCAACGAAC AGGACGCTGG GCGCGATACC GCGCACTTCG GGCCGAAGAT TGCGCAGTTG
GGTCTGAAGC TGGATGAGCT GCTAGAAGGC CCCACCCGCG AACGCTGGAT GGTGCGCTAC
CAAGGCTTTG TCGACGCCGG TGTGCCGGAG TTGCTGGCGC GTATGGTGGC GGGTACCAGC
CACCTGTACA CCCTGCTGCC GATCATTGAA GCGGCCGACG TTACCGGCCA TGAGCCTGCG
CAGGTGGCCA AGGCATTCTT CGCCGTGGGC AGCGCGCTGG ACCTGACCTG GTACCTGCAG
GAAATCAGCA ACCTGCCGGT GGAAAACAAC TGGCAGGCGC TGGCGCGCGA GGCATTCCGC
GACGATATCG ACTTGCAGCA GCGGGCGATC ACCATTTCGG TCCTGCAGAT GGCCGATGCA
CCGCAAGACA TGGATGCCCG CGTGGCGCTG TGGTCAGAGC AGCATCGGGG AATGGTGGAG
CGCTGGCGCG CCATGCTCGA CGACCTGCGC AATGCCACGG GCACTGACTA TGCGATGTAC
GCGGTGGCCA ACCGCGAGCT GGTCGACCTG GCCATGAGCG GGCAGGCAGC GGTGGTGCCG
TCCTGA
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| Protein sequence | MAFFTAASKA DFQHQLQAAL AQHISEQSLP QVALFAEQFF GIISLDELTQ RRLSDLAGCT
LSAWRIIERF DPEYPQVRVY NPDYERNGWQ STHTVVEVLH HDLPFLVDSV RTELNRRGYS
IHTLQTTVLS VRRGAKGELL ELLPKGTQGE GVRYESLMYL EIDRCANAAE LTVLTREIEQ
VLAEVRVVVA DFEPMKAKLR EVVAQVEQTG FGPAQNEKGE VKAFLEWLLD NHFTFLGYEE
FTVKGDADGG QMVYDEQSFL GLPRRLRVGL TAEELRIEDY AVAYLNEPLL LSFAKAALPS
RVHRPAYPDY VSIRQLDADG KVIKEHRFMG LYTSSVYGES VHAIPYIRVK VAEVERRSGF
DPKAHLGKEL AQVLEVLPRD DLFQTPIDEL FSTVMAIVQI QERNKIRVFL RKDPYGRFCY
CLAYVPREIY STEVRQKIQQ VLMERLKASD CEFWTFFSES VLARVQLILR VDPKNRIDID
PQQLEREVIQ ACRSWHDDYS ALVVENFGEA QGTNILADFP KGFPAGYRER FAAHSAVVDL
QHVLNLSENK PLAMSFYQPL TQVGERILHC KLYHADTPLA LSDVLPILEN LGLRVLGEFP
YRLRHANGRE YWIHDFAFTY SEGLSLDIQQ LNDTLQDAFI HIVRGDAEND AFNRLVLTAG
LPWRDVALLR AYARYLKQIR LGFDLGYIAS TLNNHTDIAR ELTRLFKTRF YLARKLTQDD
LDDKQQRLEQ AILSALDDVQ VLNEDRILRR YLDLIKATLR TNFYQPDANG QNKSYFSFKF
NPKLIPELPK PVPKFEIFVY SPRVEGVHLR FGNVARGGLR WSDREEDFRT EVLGLVKAQQ
VKNSVIVPVG AKGGFLPRRL PLGGSRDEIA AEGVACYRIF ISGLLDITDN LKDGGVVPPA
NVVRHDDDDP YLVVAADKGT ATFSDIANGI AIDYGFWLGD AFASGGSAGY DHKKMGITAR
GAWVGVQRHF RERGINVQED PITVIGVGDM AGDVFGNGLL MSDKLQLVAA FNHLHIFIDP
NPEPASSFAE RKRLFDLPRS AWSDYDTSIM SEGGGIFPRS AKSIAISPQM KERFAIEADR
LTPTELLNAL LKAPVDLLWN GGIGTYVKAS TESHADVGDK ANDALRVNGN ELRCKVVGEG
GNLGMTQLGR VEFGLNGGAT NTDFIDNAGG VDCSDHEVNI KILLNEVVQG GDMTEKQRNQ
LLGSMTDEVA GLVLGNNYKQ TQALSLAARR ARERIAEYKR LMADLEARGK LDRAIEFLPS
EEQLAERLAA GHGLTRAELS VLISYSKIDL KEQLLKSLVP DDDYLTRDME TAFPPSLVSK
FAEAMRRHRL KREIVSTQIA NDLVNNMGIT FVQRLKESTG MSPANVAGAY VIVRDIFHLP
HWFRQIEALD YQVPAEIQLT LMDELMRLGR RATRWFLRSR RNEQDAGRDT AHFGPKIAQL
GLKLDELLEG PTRERWMVRY QGFVDAGVPE LLARMVAGTS HLYTLLPIIE AADVTGHEPA
QVAKAFFAVG SALDLTWYLQ EISNLPVENN WQALAREAFR DDIDLQQRAI TISVLQMADA
PQDMDARVAL WSEQHRGMVE RWRAMLDDLR NATGTDYAMY AVANRELVDL AMSGQAAVVP
S
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