| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3645 |
|---|
| Symbol | |
|---|
| ID | 5190298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4074340 |
|---|
| End bp | 4075449 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640588101 |
|---|
| Product | dihydroorotate dehydrogenase 2 |
|---|
| Protein accession | YP_001268953 |
|---|
| Protein GI | 148548851 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCCAAG CGCTCCACGA TTTGCTGTCC TGTCAGCCCC GCGCTGGCTA TAATCGCCCC
CTCACTCACC CTGAGCCTTG CCCGCCCATG TATACCCTGG CCCGCCAGCT GCTGTTCAAG
CTTTCCCCGG AAACTTCCCA CGACCTGTCC CTGGACCTGA TCGGCGCCGG TGGCCGTTTG
GGCCTCAACG GCATGCTGTG CAAGCAACCG GCGTCATTGC CGGTTTCGGT CATGGGCTTG
AACTTCGCCA ACCCGGTGGG GCTGGCAGCT GGCCTGGACA AGAACGGCGC GGCCATCGAC
GGCTTCGCCC AGCTGGGCTT CGGCTTTGTC GAAATCGGCA CTGTCACCCC GCGTCCGCAG
CCAGGCAACC CCAAGCCACG GTTGTTCCGC CTGCCGGAAG CCACGGCCAT CATCAACCGC
ATGGGCTTCA ACAACCTGGG CGTTGATCAC CTGCTCGACC GCGTACGCGC CTCGCGCTAC
AAGGGGATGC TGGGCATCAA CATCGGCAAG AACTTCGATA CCCCGGTCGA ACGTGCCGTC
GATGACTACC TGATCTGCCT GGACAAGGTC TACACCGCCG CCAGCTACAT CACGGTCAAT
GTCAGCTCGC CCAACACCCC GGGCCTGCGC AGCCTGCAGT TCGGCGACTC GCTCAAGCAG
TTGCTCGATG CCCTGGCCGA GCGACGCGAG CAACTGGCCG GTACACATGG CAAGCGCGTG
CCCCTGGCAA TCAAGATCGC ACCGGACATG AGCGACGAAG AAACGGCGCT GGTGGCCGCC
GCGCTGATGG CGTCGGGTAT GGATGCGGTG ATCGCCACCA ACACCACGCT GGGGCGTGAA
GGTGTCGAAG CACTGCCGTA CGGTGGTGAG GCGGGCGGCC TGTCGGGCGC ACCGGTGCGG
GAGAAGAGCA CCCACATCGT CAAGGTGCTG GCAGGTGAGC TGGGCGGCAA GTTGCCGATC
ATTGCCGCCG GTGGCATTAC CGAAGGCCGC CATGCTGCCG AGAAGATTGC GGCCGGGGCG
AGCCTGGTGC AGATCTACTC GGGCTTCATT TACAAAGGGC CGGCGCTGAT TCGCGAAGCG
GTGGATGCTA TCGCGGCAAT GCCGCGGTGA
|
|---|
| Protein sequence | MCQALHDLLS CQPRAGYNRP LTHPEPCPPM YTLARQLLFK LSPETSHDLS LDLIGAGGRL
GLNGMLCKQP ASLPVSVMGL NFANPVGLAA GLDKNGAAID GFAQLGFGFV EIGTVTPRPQ
PGNPKPRLFR LPEATAIINR MGFNNLGVDH LLDRVRASRY KGMLGINIGK NFDTPVERAV
DDYLICLDKV YTAASYITVN VSSPNTPGLR SLQFGDSLKQ LLDALAERRE QLAGTHGKRV
PLAIKIAPDM SDEETALVAA ALMASGMDAV IATNTTLGRE GVEALPYGGE AGGLSGAPVR
EKSTHIVKVL AGELGGKLPI IAAGGITEGR HAAEKIAAGA SLVQIYSGFI YKGPALIREA
VDAIAAMPR
|
|---|
| |