| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3643 |
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| Symbol | rlmL |
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| ID | 5194131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4071206 |
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| End bp | 4073398 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588099 |
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| Product | 23S rRNA m(2)G2445 methyltransferase |
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| Protein accession | YP_001268951 |
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| Protein GI | 229328218 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.698608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACC GTTTCGAACT TTACCTCACC TGTCCCAAAG GCCTTGAAAG CCTGCTCGCC
GAAGAGGCCA AGGGCCTCGG CCTTGACGAG GTGCGCGAGC ACACCTCGGC CATTCGCGGC
GCCGCCGACA TGGAAACTGC TTACCGCCTG TGTGTCTGGT CACGTCTGGC CAACCGCGTA
TTGCTGGTGC TCAAGCGCTT CTCGATGAAG AACGCCGACG ACCTTTACGA CGGCGTGCAC
GCGGTCGACT GGGCTGACCA CCTGGCAGCC GACGGCACCC TGGCTGTGGA GTTCAGCGGC
CATGGCTCAG GCATCGACAA TACTCACTTC GGTGCGCTGA AGGTCAAGGA TGCGATCGTC
GACAAGCTGC GTAACCGCGA AGGCCTGCGC CCGTCCGTGG AAAAGATCGA CCCTGACGTG
CGTGTGCATC TGCGCCTGGA CCGCGGGGAG GCCATTTTGT CCCTCGACCT GTCCGGGCAC
AGCCTGCACC AGCGTGGCTA CCGCCTGCAG CAAGGCGCCG CGCCGCTGAA GGAAAACCTG
GCGGCAGCGG TGCTGATCCG TGCTGGCTGG CCGCGTATTG CTGCCGAAGG TGGTGCGCTG
GCCGACCCGA TGTGCGGTGT GGGTACCTTC CTGGTCGAGG CCGCGATGAT CGCCGCCGAT
ATCGCCCCCA ACCTCAAGCG CGAACGCTGG GGCTTCAGTG CCTGGCTCGG CCATGTGCCG
GCGCTGTGGC GCAAGGTGCA TGACGAAGCG CAGGCGCGCG CGCAGGCCGG CCTGGCCAAG
CCACCGCTGT GGATCCGTGG CTACGAGGCT GACCCGCGGC TGATCCAGCC GGGCCGCAAC
AACGTCGAGC GTGCCGGCTT GGGCGACTGG GTGAAGATCT ACCAAGGCGA AGTCAGTACC
TTCGAGCCAC GCCCGGACCA GAACCAGAAA GGCCTGGTCA TCAGCAACCC GCCCTACGGT
GAGCGCCTGG GTGACGAAGC CAGCCTGCTG TACCTCTATC AGAATCTGGG CGAGCGCCTG
CGCCAGGCCT GCATGGGCTG GGAAGCAGCG GTATTCACTG GTGCGCCGCA ACTGGGCAAG
CGCATGGGCA TTCGTAGCCA CAAGCAGTAC GCGTTCTGGA ACGGCGCATT GCCATGCAAG
CTGCTGCTGT TCAAGGTGCA GCCTGACCAG TTCGTCACCG GTGAACGCCG CGAAGCGCAG
CCTGAAGGCA CCGAAGCCCG CCAGCAGGTG CCGCAGGCCA GCGAGCCCGC TCGGCTGTCG
GAAGGGGCGC AGATGTTTGC CAACCGCCTG CAGAAGAACC TCAAGCAACT GGGCAAGTGG
GCCCGTCGCG AGCAGATCGA CTGCTACCGC TTGTACGATG CCGACATGCC TGAATATGCC
TTGGCGGTCG ACCTGTACCA GGACTGGGTA CACGTGCAGG AATACGCCGC GCCACGTTCG
GTCGACCCGG ACAAGGCTCA GGCGCGTCTG CTCGATGCAC TGGCGGCCAT TCCGCAGGCG
TTGGGCATTT CGCCGCAGCG TGTAGTGCTC AAACGTCGCG AGCGGCAAAG CGGCACGCGC
CAGTACGAAC GTCAGGCTAC CGAGGGCCGC TTCCAGGAAG TGAACGAAGG TGGCGTCAAG
CTGCTGGTCA ACCTCACCGA CTACCTGGAT ACCGGGCTGT TCCTCGACCA CCGCCCGATG
CGTATGCGCA TCCAGCGTGA GGCTGCCGGC AAGCGCTTCC TCAACCTGTT CTGCTACACC
GCCACGGCCA CCGTGCACGC GGCCAAGGGC GGTGCGCGCA GCACCACCAG CGTCGACCTG
TCAAAAACCT ACCTGGACTG GGCGCGGCGT AACCTGGCAC TCAATGGCTA TTCCGAGCGC
AACCGCCTGG AGCAAAGCGA TGTAATGGCT TGGCTGGAAG GCAACCGTGA CAGCTACGAC
CTGATCTTCA TCGACCCGCC AACCTTCTCC AACTCCAAGC GCATGGAAGG TGTATTCGAC
GTGCAGCGTG ACCATGTTCA GCTGTTGGAC CTGGCCATGG CCCGTCTGGC GCCGGGTGGT
GTGCTGTATT TCTCCAACAA CTTCCGCAAG TTCCAGCTGG ACGAGCACCT GATGGCGCGT
TACGTGGTGG AAGAAATCAG CGCGCAGACC CTGGACCCGG ACTTCGCGCG TAATAACCGT
ATCCATCGCG CCTGGCGTTT GCAGCTTCGT TGA
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| Protein sequence | MSDRFELYLT CPKGLESLLA EEAKGLGLDE VREHTSAIRG AADMETAYRL CVWSRLANRV
LLVLKRFSMK NADDLYDGVH AVDWADHLAA DGTLAVEFSG HGSGIDNTHF GALKVKDAIV
DKLRNREGLR PSVEKIDPDV RVHLRLDRGE AILSLDLSGH SLHQRGYRLQ QGAAPLKENL
AAAVLIRAGW PRIAAEGGAL ADPMCGVGTF LVEAAMIAAD IAPNLKRERW GFSAWLGHVP
ALWRKVHDEA QARAQAGLAK PPLWIRGYEA DPRLIQPGRN NVERAGLGDW VKIYQGEVST
FEPRPDQNQK GLVISNPPYG ERLGDEASLL YLYQNLGERL RQACMGWEAA VFTGAPQLGK
RMGIRSHKQY AFWNGALPCK LLLFKVQPDQ FVTGERREAQ PEGTEARQQV PQASEPARLS
EGAQMFANRL QKNLKQLGKW ARREQIDCYR LYDADMPEYA LAVDLYQDWV HVQEYAAPRS
VDPDKAQARL LDALAAIPQA LGISPQRVVL KRRERQSGTR QYERQATEGR FQEVNEGGVK
LLVNLTDYLD TGLFLDHRPM RMRIQREAAG KRFLNLFCYT ATATVHAAKG GARSTTSVDL
SKTYLDWARR NLALNGYSER NRLEQSDVMA WLEGNRDSYD LIFIDPPTFS NSKRMEGVFD
VQRDHVQLLD LAMARLAPGG VLYFSNNFRK FQLDEHLMAR YVVEEISAQT LDPDFARNNR
IHRAWRLQLR
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