Gene Pput_3617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3617 
Symbol 
ID5192599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4039794 
End bp4041041 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content63% 
IMG OID640588072 
Productglycosyl transferase, group 1 
Protein accessionYP_001268925 
Protein GI148548823 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.312002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.590963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC TCTGGACACT GCCCTATCTG CCTTGGCCGA CCACCAGCGG CCACAAGACC 
CGGCAATACC ATCTGCTGCG CGCACTGGCC CAGCGCGGTC ACCGGATTAC CCTGCTGGTG
CAGTCGAAGA TCCCTCTCTG CGACGCAGCA CGTGAGGCCC TTGAGCCCCT ACTCGAACGC
CTGATCGTGC TACCCCGCAG GCCGCTGCAC AGCCCACTCA ACCTGCTGGC CTCACCCATC
ATCGACTACC CCATGCGGGC AATCATCAAT GGCCTGGCGC CTTGCCTGCG GCACCGGTTC
GAGCAACTGC TGGACGAACC TTGGGACGTG ATCCAGATCG AGCACAGTTA CAGCTTCCAG
CCGTTCGAAA AAGCCCTGCA GGCTCGCAGG CTGCCCTACA TGCTTAGTGA GCACACCCTG
GAATCGGTAA TGGGCAGCGC CTGCCACGAT CGCCTGCCGC TGTGGCTGCG CCCGCTCAAC
GCCTTCGACC GCTGGCGCTA CCGGCGCTGG GAGCACCGTG TGCTGCGCCA GCCCACCGAA
CTGGTGGCTG TCAGCGCCCA TGATGCCGAG CTGATCGCGC AGATCAGTGG GCGCCCGGTG
AATGTGGTGG TTAACGGCGT GGACTGTGAT TTCTACCAGC AGGTGCAACC TGCGCTGCAC
AGCCAGCGTC TGTTGTTCGT CGGCAATTTC GAATATGGCG CCAATCTGGA GGCCATCGAA
TGGGCACTGG ACGACATCAT GCCGAAGGTG TGGATGAGCA ACCCGGCGGT GCGCCTGGCG
ATTGCCGGGC ACGCCATGCC GGCCAACTGG AAGCTTCACT GGAACGACCC ACGCATTGAA
TGGTTTGGCT ACCGCCCCGA CCTGCGTGAA CTGCAACGAC GTTCAGCGCT GTTCTTTGCT
CCCCTGCGTT ATGCCGGTGG CTCGAAGGTG AAAATCCTCG AAGCGATGGC CGCCGGCTTA
CCCGTGATCA CCACCGACAA GGGCGTGTCA GGCCTGACCG TGAACAACGG CGAACACTAC
TTGGGCAGTG ACGACGGTGA TCAACTGGCA TTGCTGATCA CCCAGCTGCT CAATCAGCCC
TGGCGCATGA GCCAGTTGAG CGATGCCGGG CGCCAGTTTG CCCGCCAGCG CCACGACTGG
AGCGTGGCTG CCCAACAACT GGAGAATGTG CACATACGCC TGACCCAGGC GGCACCGGCC
GAGGCCACGC CGCTGGCCAG TGCCTGGCTG GGCCGCTCAG CCAAGTAG
 
Protein sequence
MRILWTLPYL PWPTTSGHKT RQYHLLRALA QRGHRITLLV QSKIPLCDAA REALEPLLER 
LIVLPRRPLH SPLNLLASPI IDYPMRAIIN GLAPCLRHRF EQLLDEPWDV IQIEHSYSFQ
PFEKALQARR LPYMLSEHTL ESVMGSACHD RLPLWLRPLN AFDRWRYRRW EHRVLRQPTE
LVAVSAHDAE LIAQISGRPV NVVVNGVDCD FYQQVQPALH SQRLLFVGNF EYGANLEAIE
WALDDIMPKV WMSNPAVRLA IAGHAMPANW KLHWNDPRIE WFGYRPDLRE LQRRSALFFA
PLRYAGGSKV KILEAMAAGL PVITTDKGVS GLTVNNGEHY LGSDDGDQLA LLITQLLNQP
WRMSQLSDAG RQFARQRHDW SVAAQQLENV HIRLTQAAPA EATPLASAWL GRSAK