Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3614 |
Symbol | |
ID | 5195133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4037121 |
End bp | 4038017 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588069 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001268922 |
Protein GI | 148548820 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.753486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.27992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCCAC GCTTGAAGAC TTCTTTGCAT TGCTGCTCCC GCGCCGCCGT GCTGCGTTGG GCAACGGTCG GGCTTTGCGT GGCCTCACTG GTTGCCAACA TGGCGCTGTA CCTGGCCAAC CAGACAATCC CGGCCACCCT GCTGGTGCTG CAGTTGGTCG CCACGCTGGG TGCTGTTGTA CAACTGGGGC TGGGCGCCAG GTCGATCCAC CTGCGCCCGG CCGAGCTGGC CGAGCGCATG CTCAAGGTGC AAGAAGACGA GCGTCAGCAT CTGAGCCGGG AACTGCACGA CGACATCGGT CAACTGCTCA CCGCTGCCAA GCTGCAACTG CAGTGGCTGC AACGGCGCAT GCCCGAAGAC TTGCAGGGGC ACTGCGACGC CCTGCGCAGC ACACTGGATG ACACCCTCGG TAACGTGCGC GATGTTTCCG CGCTGCTCAA CCCCCGGCAG TTGGCCAGCC TTGGCCTGGA GGCCAGCCTG CGCGCGCACC TGGTACGCAC CCTGGCCAGC AGCGGCGTGC ACTGGAGCCT GGCGTGCAAC CAGCGCCTGG GCGGCATCGA CGAAGCCGTG GCCATGGCGG TGTTCCGTAT TACCCAGGAG GCAGTGACCA ACATGCTGCG CCACGCCCAG GCACACAACC TGGTCATCCG CCTGCAACGC ACCCCTGAGG GGCTGGCGTT GTCGATCCAC GACGATGGTC GTGGTTTCGC CCCTGCCCGG CACCCGGCCG AAGCCGGTCA GCGCGGCTTG GCCGGCATGC AGGAGCGGGT AATCGCGCTG CAGGGCAGCC TCGACATCAC CAGTCAGCCT GGCCGAGGCA CACAGATCGA AGCGATGTTC CCGTGGTCCC CGCGCACCCA GCAACGCGCC AGGAGTATTA CCAACCATGA CCTGTAG
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Protein sequence | MFPRLKTSLH CCSRAAVLRW ATVGLCVASL VANMALYLAN QTIPATLLVL QLVATLGAVV QLGLGARSIH LRPAELAERM LKVQEDERQH LSRELHDDIG QLLTAAKLQL QWLQRRMPED LQGHCDALRS TLDDTLGNVR DVSALLNPRQ LASLGLEASL RAHLVRTLAS SGVHWSLACN QRLGGIDEAV AMAVFRITQE AVTNMLRHAQ AHNLVIRLQR TPEGLALSIH DDGRGFAPAR HPAEAGQRGL AGMQERVIAL QGSLDITSQP GRGTQIEAMF PWSPRTQQRA RSITNHDL
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