Gene Pput_3614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3614 
Symbol 
ID5195133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4037121 
End bp4038017 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content66% 
IMG OID640588069 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001268922 
Protein GI148548820 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.753486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.27992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCAC GCTTGAAGAC TTCTTTGCAT TGCTGCTCCC GCGCCGCCGT GCTGCGTTGG 
GCAACGGTCG GGCTTTGCGT GGCCTCACTG GTTGCCAACA TGGCGCTGTA CCTGGCCAAC
CAGACAATCC CGGCCACCCT GCTGGTGCTG CAGTTGGTCG CCACGCTGGG TGCTGTTGTA
CAACTGGGGC TGGGCGCCAG GTCGATCCAC CTGCGCCCGG CCGAGCTGGC CGAGCGCATG
CTCAAGGTGC AAGAAGACGA GCGTCAGCAT CTGAGCCGGG AACTGCACGA CGACATCGGT
CAACTGCTCA CCGCTGCCAA GCTGCAACTG CAGTGGCTGC AACGGCGCAT GCCCGAAGAC
TTGCAGGGGC ACTGCGACGC CCTGCGCAGC ACACTGGATG ACACCCTCGG TAACGTGCGC
GATGTTTCCG CGCTGCTCAA CCCCCGGCAG TTGGCCAGCC TTGGCCTGGA GGCCAGCCTG
CGCGCGCACC TGGTACGCAC CCTGGCCAGC AGCGGCGTGC ACTGGAGCCT GGCGTGCAAC
CAGCGCCTGG GCGGCATCGA CGAAGCCGTG GCCATGGCGG TGTTCCGTAT TACCCAGGAG
GCAGTGACCA ACATGCTGCG CCACGCCCAG GCACACAACC TGGTCATCCG CCTGCAACGC
ACCCCTGAGG GGCTGGCGTT GTCGATCCAC GACGATGGTC GTGGTTTCGC CCCTGCCCGG
CACCCGGCCG AAGCCGGTCA GCGCGGCTTG GCCGGCATGC AGGAGCGGGT AATCGCGCTG
CAGGGCAGCC TCGACATCAC CAGTCAGCCT GGCCGAGGCA CACAGATCGA AGCGATGTTC
CCGTGGTCCC CGCGCACCCA GCAACGCGCC AGGAGTATTA CCAACCATGA CCTGTAG
 
Protein sequence
MFPRLKTSLH CCSRAAVLRW ATVGLCVASL VANMALYLAN QTIPATLLVL QLVATLGAVV 
QLGLGARSIH LRPAELAERM LKVQEDERQH LSRELHDDIG QLLTAAKLQL QWLQRRMPED
LQGHCDALRS TLDDTLGNVR DVSALLNPRQ LASLGLEASL RAHLVRTLAS SGVHWSLACN
QRLGGIDEAV AMAVFRITQE AVTNMLRHAQ AHNLVIRLQR TPEGLALSIH DDGRGFAPAR
HPAEAGQRGL AGMQERVIAL QGSLDITSQP GRGTQIEAMF PWSPRTQQRA RSITNHDL