Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3608 |
Symbol | |
ID | 5193571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4029365 |
End bp | 4029805 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640588063 |
Product | UspA domain-containing protein |
Protein accession | YP_001268916 |
Protein GI | 148548814 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.358614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.126193 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATACG AACATTTGTT GGTCGCCGTC GACCTGACCG AAGAATGCGA CCCGGTGATC AAGCGCGCCA TGGCGCTGGC AGAGCCTTCG AATGCCAAGG TATCCCTGGT GCACATCGTC GAGCCGATGG CCATGGCCTT CGGCGGTGAC GTACCGATGG ACCTGTCGCA GCTGCAACAG CAGCAGTTCG ACCAGGCCAA GGAGCGCATG GACCGCCTGT TCAACAAATA CCCGGGAATC AACCGCGGCG ACTCGCACCT GACCTACGGC CAGCCTCGCC AGGAAATCCA CCAGTTGGCC AAGGACCAGC AGTGCGATCT GATCGTTGTC GGCAGCCATG GCCGTCACGG CCTGGCATTG CTGCTGGGCT CCACGGCCAA CGATGTGCTG CACGGTGCGC CGTGTGACGT GCTGGCGGTA CGCTTGCTGA AGAAGGATTG A
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Protein sequence | MQYEHLLVAV DLTEECDPVI KRAMALAEPS NAKVSLVHIV EPMAMAFGGD VPMDLSQLQQ QQFDQAKERM DRLFNKYPGI NRGDSHLTYG QPRQEIHQLA KDQQCDLIVV GSHGRHGLAL LLGSTANDVL HGAPCDVLAV RLLKKD
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