Gene Pput_3608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3608 
Symbol 
ID5193571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4029365 
End bp4029805 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content61% 
IMG OID640588063 
ProductUspA domain-containing protein 
Protein accessionYP_001268916 
Protein GI148548814 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.358614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.126193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATACG AACATTTGTT GGTCGCCGTC GACCTGACCG AAGAATGCGA CCCGGTGATC 
AAGCGCGCCA TGGCGCTGGC AGAGCCTTCG AATGCCAAGG TATCCCTGGT GCACATCGTC
GAGCCGATGG CCATGGCCTT CGGCGGTGAC GTACCGATGG ACCTGTCGCA GCTGCAACAG
CAGCAGTTCG ACCAGGCCAA GGAGCGCATG GACCGCCTGT TCAACAAATA CCCGGGAATC
AACCGCGGCG ACTCGCACCT GACCTACGGC CAGCCTCGCC AGGAAATCCA CCAGTTGGCC
AAGGACCAGC AGTGCGATCT GATCGTTGTC GGCAGCCATG GCCGTCACGG CCTGGCATTG
CTGCTGGGCT CCACGGCCAA CGATGTGCTG CACGGTGCGC CGTGTGACGT GCTGGCGGTA
CGCTTGCTGA AGAAGGATTG A
 
Protein sequence
MQYEHLLVAV DLTEECDPVI KRAMALAEPS NAKVSLVHIV EPMAMAFGGD VPMDLSQLQQ 
QQFDQAKERM DRLFNKYPGI NRGDSHLTYG QPRQEIHQLA KDQQCDLIVV GSHGRHGLAL
LLGSTANDVL HGAPCDVLAV RLLKKD