| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3606 |
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| Symbol | fadB |
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| ID | 5190372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4026058 |
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| End bp | 4028205 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640588061 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001268914 |
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| Protein GI | 148548812 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.28427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTACG AAGGTAAAGC CATCACGGTT AAGGCTCTTG AAAGTGGCAT CGTCGAGCTC
AAGTTCGACC TCAAGGGTGA GTCCGTCAAC AAGTTCAACC GCCTTACCCT GAACGAGCTG
CGCCAGGCCG TCGATGCCAT CCGGGCCGAT GCCTCAGTCA AGGGCGTGAT CGTCAGCAGT
GGCAAGGACG TGTTCATCGT CGGCGCCGAC ATCACCGAGT TCGTCGACAA CTTCAAGCTG
CCTGAGGCCG AACTGGTCGC TGGCAACCTG GAAGCCAATC GCATCTTCAA CGCCTTTGAA
GACCTCGAAG TGCCGACCGT TGCCGCCATC AACGGCATCG CGCTGGGCGG CGGCCTGGAA
ATGTGCCTGG CGGCCGACTA CCGGGTCATG TCCACCAGCG CCAGGATCGG CCTGCCGGAA
GTCAAGCTGG GTATCTACCC GGGCTTTGGC GGTACCGTGC GCCTGCCGCG CCTGATCGGC
TCGGACAACG CCATCGAGTG GATCGCCGCC GGCAAGGAAA ACCGTGCCGA AGACGCCCTG
AAAGTGGGGG CCGTCGACGC CGTGGTCGCC CCTGAGCTGC TGCTGGCCGG TGCCCTCGAC
CTGATCAAGC GTGCCATCAG TGGCGAGCTG GACTACAAGG CCAAGCGCCA GCCGAAGCTG
GAAAAGCTCA AGCTCAATGC CATCGAGCAG ATGATGGCCT TCGAGACTGC CAAGGGCTTC
GTCGCTGGCC AGGCCGGCCC GAACTATCCG GCCCCGGTCG AAGCGATCAA GAGCATCCAG
AAAGCCGCCA ACTTCGGTCG CGACAAGGCC CTGGAAGTCG AAGCCGCAGG CTTTGCCAAG
CTGGCCAAGA CCTCGGTCGC CGAGAGCCTG ATCGGCTTGT TCCTCAACGA TCAGGAACTC
AAGCGCAAGG CCAAGGCGCA TGACGAGATC GCCCACGACG TGAAGCAGGC CGCCGTGCTC
GGCGCCGGCA TCATGGGCGG CGGTATCGCC TATCAGTCGG CGGTCAAAGG TACGCCGATC
CTGATGAAAG ACATCCGCGA AGAAGCCATT CAGCTGGGTC TGAATGAGGC CTCCAAGTTG
CTTGGCAACC GCGTCGAGAA GGGCCGCCTG ACCCCGGCCA AGATGGCCGA GGCCCTCAAC
GCCATTCGAC CGACCCTGTC CTATGGCGAT TTCGCCAATG TCGACATCGT CGTCGAGGCT
GTGGTCGAGA ACCCGAAGGT CAAGCAAGCG GTACTGGCAG AAGTGGAAGG CCAGGTGAAG
GACGATGCGA TCCTCGCTTC CAACACCTCT ACCATCTCTA TCAACCTGCT GGCCAAGGCG
CTCAAGCGCC CGGAAAACTT CGTCGGCATG CACTTCTTCA ACCCGGTGCA CATGATGCCG
CTGGTGGAAG TGATCCGTGG TGAGAAGTCC AGTGACGTGG CGGTCGCCAC CACCGTGGCC
TACGCCAAGA AAATGGGCAA GAACCCGATT GTGGTCAACG ACTGCCCGGG CTTTTTGGTC
AACCGCGTGC TGTTCCCGTA CTTTGGCGGT TTTGCCAAGC TGGTCAGCGC CGGTGTCGAC
TTTGTGCGCA TCGACAAGGT CATGGAGAAG TTCGGCTGGC CGATGGGCCC AGCCTACCTG
ATGGACGTGG TCGGCATCGA CACCGGCCAC CACGGCCGTG ACGTCATGGC CGAAGGCTTC
CCGGATCGCA TGAAGGACGA GCGCCGCTCG GCAGTCGACG CGTTGTACGA GTCCAACCGC
CTGGGCCAGA AGAACGGCAA GGGCTTTTAC GCCTACGAAA CCGACAAGCG CGGCAAACCG
AAGAAGGTCT TCGATGCCAC CGTGCTCGAC GTGCTCAAAC CGATCGTGTT CGAGCAGCGT
GAAGTCACTG ACGAAGACAT CATCAACTGG ATGATGGTCC CGCTGTGCCT GGAGACCGTG
CGTTGCCTGG AAGACGGCAT CGTCGAAACC GCTGCCGAAG CCGACATGGG CCTGGTCTAC
GGCATTGGTT TCCCTCCCTT CCGCGGTGGT GCGCTGCGTT ACATCGACTC GATCGGTGTG
GCCGAATTCG TCGCCCTGGC CGATCAGTAT GCCGACCTGG GGCCGCTGTA CCACCCGACC
GCCAAGCTGC GTGAAATGGC CAAGAACGGC CAGCGCTTCT TCAACTGA
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| Protein sequence | MIYEGKAITV KALESGIVEL KFDLKGESVN KFNRLTLNEL RQAVDAIRAD ASVKGVIVSS
GKDVFIVGAD ITEFVDNFKL PEAELVAGNL EANRIFNAFE DLEVPTVAAI NGIALGGGLE
MCLAADYRVM STSARIGLPE VKLGIYPGFG GTVRLPRLIG SDNAIEWIAA GKENRAEDAL
KVGAVDAVVA PELLLAGALD LIKRAISGEL DYKAKRQPKL EKLKLNAIEQ MMAFETAKGF
VAGQAGPNYP APVEAIKSIQ KAANFGRDKA LEVEAAGFAK LAKTSVAESL IGLFLNDQEL
KRKAKAHDEI AHDVKQAAVL GAGIMGGGIA YQSAVKGTPI LMKDIREEAI QLGLNEASKL
LGNRVEKGRL TPAKMAEALN AIRPTLSYGD FANVDIVVEA VVENPKVKQA VLAEVEGQVK
DDAILASNTS TISINLLAKA LKRPENFVGM HFFNPVHMMP LVEVIRGEKS SDVAVATTVA
YAKKMGKNPI VVNDCPGFLV NRVLFPYFGG FAKLVSAGVD FVRIDKVMEK FGWPMGPAYL
MDVVGIDTGH HGRDVMAEGF PDRMKDERRS AVDALYESNR LGQKNGKGFY AYETDKRGKP
KKVFDATVLD VLKPIVFEQR EVTDEDIINW MMVPLCLETV RCLEDGIVET AAEADMGLVY
GIGFPPFRGG ALRYIDSIGV AEFVALADQY ADLGPLYHPT AKLREMAKNG QRFFN
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