| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3593 |
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| Symbol | |
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| ID | 5192615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4008181 |
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| End bp | 4009644 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640588048 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_001268901 |
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| Protein GI | 148548799 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.777214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.264325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAAGG TTCCCGTGAC TCAGAAGCCC GACCAGTGTC TTGGTGAGTG GATTGATCGT
GAAGCCCTGG CTGAAGCGAT GATCCCGCTT ATCGGTCAGC TCTACCGCAA TAACAATGTG
GTGAGCTCGA TTTATGGCCG CAGCCTGATC AACCGTTCGG TTATCTCGAT CCTCAAGGCG
CACCGCTTTG CGCGCCACCG CCAAACCGAC GAAACCGAAC TGTCCGTCCA CGAGACATTC
CCCCTGCTCA AGGCCATGAG CGAGCTGAAA CTGGGCGCCG CATCGGTCGA CCTGGGCAAG
CTGGCCAACA AGTTCAAGCA GGAAGGCAAT GGCCGCACTG CCGAGCAGTT CGTCCGTGAA
GAGCTGGCCG ACGTGGTCGG TCAGCAGAAC GCTTCGGCGC GCAAAGGCAC CGACGTTGTC
CTGTACGGCT TCGGTCGCAT CGGCCGCCTG CTGGCGCGCA TCCTGATCGA GAAGACCGGT
GGTGGTGACG GCCTGCGTCT GCGTGCCATC GTCGTGCGCA AAGGCGCCGA AAACGACCTG
GTCAAGCGTG CCAGCCTGCT GCGCCGTGAC TCGGTGCACG GCCCGTTCGA TGGCACCATC
ACCATCGACG AAGCCAACAA CACCATCACC GCCAATGGCA ACCTGATCCA GGTTATCTAC
GCCAAGAGCC CGAGCGAAGT CGACTACACC CAGTACGGCA TCGACAATGC GCTCATCGTC
GACAACACCG GCGTATGGCG TGACGCCGAC GGCCTGGGCC AGCACCTGGC CTGCCCGGGT
GCTGCCCGCG TGATCCTCAC CGCACCTGGC AAGGGCGCGC TGAAGAACAT CGTGCACGGT
ATCAACCACG GTGATATCAC TGCCGATGAC AAGATCATCT CGGCGGCCTC CTGCACCACC
AACGCCATCG TGCCGGTGCT CAAGGCCATC AACGACCAGT ACGGCATCGT CAACGGCCAC
GTCGAAACCG TTCACTCGTT CACCAACGAC CAGAACCTGA TCGACAACTT CCACAAGGGC
AGCCGCCGTG GCCGTGCCGC GCCGCTGAAC ATGGTAATCA CCGAAACCGG CGCCGCCACC
GCTGCTGCCA AGGCACTGCC AGTGCTGAAG GGCAAGCTGA CCGGCAACGC GATTCGTGTT
CCGACGCCGA ACGTTTCGAT GGCCATCCTG AACCTGAATC TGGAAAAGGC CACCACCCGC
GACGAGATCA ACGAGTACCT GCGCCAGACC GCCATGCACT CGGAGCTGCA CAAGCAGATC
GACTACGTGG CTTCGCAGGA AGTGGTTTCG ACCGACTTCG TCGGCTCGCG CCATGCCGGT
GTGGTTGACG CAGAGGCGAC CATCGCCAAC GACAACCGCG TTGTTCTGTA CGTCTGGTAC
GACAACGAAT TTGGTTATAG CTGCCAGGTG GTTCGTGTGA TGGAAGACAT GGCCGGTGTG
AACCCGCCAG CGTTTCCACG CTGA
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| Protein sequence | MWKVPVTQKP DQCLGEWIDR EALAEAMIPL IGQLYRNNNV VSSIYGRSLI NRSVISILKA
HRFARHRQTD ETELSVHETF PLLKAMSELK LGAASVDLGK LANKFKQEGN GRTAEQFVRE
ELADVVGQQN ASARKGTDVV LYGFGRIGRL LARILIEKTG GGDGLRLRAI VVRKGAENDL
VKRASLLRRD SVHGPFDGTI TIDEANNTIT ANGNLIQVIY AKSPSEVDYT QYGIDNALIV
DNTGVWRDAD GLGQHLACPG AARVILTAPG KGALKNIVHG INHGDITADD KIISAASCTT
NAIVPVLKAI NDQYGIVNGH VETVHSFTND QNLIDNFHKG SRRGRAAPLN MVITETGAAT
AAAKALPVLK GKLTGNAIRV PTPNVSMAIL NLNLEKATTR DEINEYLRQT AMHSELHKQI
DYVASQEVVS TDFVGSRHAG VVDAEATIAN DNRVVLYVWY DNEFGYSCQV VRVMEDMAGV
NPPAFPR
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