Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3590 |
Symbol | |
ID | 5194741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4004639 |
End bp | 4005355 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588045 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_001268898 |
Protein GI | 148548796 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.30357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCTGA TCTACGGCCA TCGCGGCGCC AAGGGCGAAG CACCCGAGAA CACCCTGAAG AGCTTTCAGC AATGCCTGTC CCATGGCGTG ACCCGCTGCG AGCTGGACCT GCACTTGTCA TCCGACAACG AACTGATGGT CATCCACGAC CCCACCCTCA AGCGCACCAC GGGCCGGCGC GGCAAAGTGG TCGAGCACCC GGCCGCCGAA CTGGTCAAGA TCGATGCCCG CAAAGGCGGC CCGGGCCATG TGCAGCCCTG CCCGATCCCG AAACTGGAAG AGCTGTTCGA AAAATGCCCG TTCGAACACT GGCAACTGGA GGTGAAAAGC GCCTCGCGCA CCCGCGCGGC CACCACCGTC CTGGCGATCC GTGAACTGGC CCAGCAATAT GGCCTGCTGG ACAAGGTGAC CATCACCTCC AGTTCACGCG AAGTACTGGG CGCCGCCCTG GAACTGGTGC CAGACGTGAA GCGTGGGCTG GTGGCCGAAT ACGCCTGGCT CGACCCGCTG AAGGTGGCAC AGAACTACGG CTGCGAACTG CTGGCATTGA ACTGGACGCT GTGCACCCCC GAGCGCCTGC TCAAAGCACA GGGCCAGGGT TTGCATGTGT CGGTGTGGAC GGTCAACGAG CCGGCACTGA TGCGCCGGCT TGCTGACTTT GGTGTGGACA GCCTGATTAC AGACTTTCCC GGTTTGGCCA AGACCACCCT CGGGTAG
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Protein sequence | MTLIYGHRGA KGEAPENTLK SFQQCLSHGV TRCELDLHLS SDNELMVIHD PTLKRTTGRR GKVVEHPAAE LVKIDARKGG PGHVQPCPIP KLEELFEKCP FEHWQLEVKS ASRTRAATTV LAIRELAQQY GLLDKVTITS SSREVLGAAL ELVPDVKRGL VAEYAWLDPL KVAQNYGCEL LALNWTLCTP ERLLKAQGQG LHVSVWTVNE PALMRRLADF GVDSLITDFP GLAKTTLG
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