Gene Pput_3585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3585 
Symbol 
ID5192605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3999297 
End bp4000646 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content66% 
IMG OID640588040 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_001268893 
Protein GI148548791 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.500681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGGA TTTCCCTCGG CAGCCGCCTG GCCCTGCTGT TCGCCGCCTG CACGGCCACC 
GTCTCGCTAG GCGCCGGGCT GCTATTCAGC CGGGCCAGCG AGCAGCACTT CGTCGAACTT
GACCAACAAC TGCTGGACTC GCGCCTGTCC TTGTTTCGTA CGCAACTGGC TGATGTCAGC
ACGGCTGATG AGCTCCAGGC CCGCCTGCCT GCCCTGCGCG ATGAACTGAG TCACCAGGCC
GACCTGGCCT TGCGTATCAG CGCCAGCAAT GGCGCCACCT GGTTCGAAAG CCGCAGCGGG
CTGCCGCAAG CAGCGCTGGC CACCGGGCTG GCCACCCTGC ATGCGCAAGG CATCGACTAC
CGCAGCCTGT CCGTGCCCCT GAAACAGGGC GCCATGCAGT CGCCGCGACT GACCCTGTAC
CTCGACATCA CCCACCACCA GCACTTCCTG CAGGGCATGC AACGGCTGAT CTGGCTGACG
GTCGGCCTGT CGGCGCTAAC CACCGCACTA CTGGGTGCCT GGGCCGCCCG CAGCGGCCTG
CGCCCCTTGC GGCAGATGGG CCAGGTGGCC GCCAGCGTGT CAGCGCGTTC GCTCACCACC
CGTCTGCCGG TGGCGCAGAT GCCCGAAGAG TTGGCCGAGC TGGCCAGCAG CATGAACGCG
ATGCTGCAGC GCCTGGACGA TGCCTTCCAG CGCCTGTCAG CGTTCTCGGC CGATATCGCC
CACGAGTTGC GTACGCCGCT GTCCAACCTG CTGACCCACA CCCAGGTCAC CCTCACCCGC
CCACGCAGCC TCGAAGAATA CCGAGAGGCG CTGCATGGCA ACCTGGAAGA ACTGCAATGG
ATGGCGCAGA TGATCAACGA CATGCTGTTT CTGGCCAAGG CTGACCACGG CCTGCTGGTA
CCGGGGCACG CGCCTTTGGC GCTGCATGAC GAGGTGGATG CACTGCTGGA GTACTACGCG
CCTCTGGCAG AAGACAACGA CGTGCAGATG CTGCGCGAGG GTGAAGCGGT GCTGCACGGC
GACCAGCATA TGCTGCGCCG GGCGCTGTCC AACCTGCTGG ACAACGCCAT GCGTTTTACC
CCGGCAGGAG GACAGATCAA GGTGACCCTG GGGCCGGGGC CGACGATCAA CGTGGCCAAT
ACCGGGCTGG CTATCGACCC GGCGGCACTA CCGCGGCTTT TCGACCGTTT CTACCGGGTG
GACCCGGCTC GGCGGGAAGG CAGTAGCGAG CATGCGGGGT TGGGCCTGGC GATTACCCGG
TCGATCGTGC AGGCCCATGG CGGGTGCATA CGGGCGGAGT GCGAGGGTGG GTGGACCCGA
TTCGTGATCG AGTTCGCTCA AGATCGGTAA
 
Protein sequence
MRRISLGSRL ALLFAACTAT VSLGAGLLFS RASEQHFVEL DQQLLDSRLS LFRTQLADVS 
TADELQARLP ALRDELSHQA DLALRISASN GATWFESRSG LPQAALATGL ATLHAQGIDY
RSLSVPLKQG AMQSPRLTLY LDITHHQHFL QGMQRLIWLT VGLSALTTAL LGAWAARSGL
RPLRQMGQVA ASVSARSLTT RLPVAQMPEE LAELASSMNA MLQRLDDAFQ RLSAFSADIA
HELRTPLSNL LTHTQVTLTR PRSLEEYREA LHGNLEELQW MAQMINDMLF LAKADHGLLV
PGHAPLALHD EVDALLEYYA PLAEDNDVQM LREGEAVLHG DQHMLRRALS NLLDNAMRFT
PAGGQIKVTL GPGPTINVAN TGLAIDPAAL PRLFDRFYRV DPARREGSSE HAGLGLAITR
SIVQAHGGCI RAECEGGWTR FVIEFAQDR