Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3584 |
Symbol | |
ID | 5191816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3998617 |
End bp | 3999297 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588039 |
Product | two component heavy metal response transcriptional regulator |
Protein accession | YP_001268892 |
Protein GI | 148548790 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTGC TGATCGTCGA AGACCAGGCC CGCACCGGCC AGTACCTTAG CCAAGGCCTG AGCGAGGCCG GCTTTGCCAC CGAATTGGCT ACCGATGGCG AGACCGGCCA GTTCCTCGCC CTGACCGGCG ACCACGACCT GCTGATCCTC GACGTGATGC TGCCTGGCCG CGACGGCTGG CAGATTCTTC AGGCCGTGCG CCAGGCAGGC CTGGATACGC CAGTGCTGTT CCTGACCGCC CGCGACGCCG TCGAGGATCG CGTGCATGGC CTGGAACTGG GCGCCGACGA CTACCTGGTC AAGCCGTTCG CCTTTTCCGA ACTGCTGGCC CGGGTACGCA GCCTGCTGCG CCGTGGCACC AGCCCGAGCC AGGACACGAC CCTGAGCCTG GCCGACCTGC GCCTGGACCT GATCCGACGC CGCGCCGAGC GCGCCGGGCT GCGCATCGAC CTGACCGCAA AGGAATTCTC ACTCCTTGAG CTGCTGCTGC GCCGCCAGGG TGAGGTGCTG CCAAAATCGC TGATCGCCTC GCAGGTGTGG GACATGAACT TCGACAGCGA CACCAATGTG ATCGAAGTGG CCATCCGCCG CCTGCGCCTG AAAATCGACG ACCCGCACCC CAACAAGCTG ATCCACACCG TACGCGGCAT GGGTTACGTA CTCGAAGAGC GCGCCGAGTG A
|
Protein sequence | MKLLIVEDQA RTGQYLSQGL SEAGFATELA TDGETGQFLA LTGDHDLLIL DVMLPGRDGW QILQAVRQAG LDTPVLFLTA RDAVEDRVHG LELGADDYLV KPFAFSELLA RVRSLLRRGT SPSQDTTLSL ADLRLDLIRR RAERAGLRID LTAKEFSLLE LLLRRQGEVL PKSLIASQVW DMNFDSDTNV IEVAIRRLRL KIDDPHPNKL IHTVRGMGYV LEERAE
|
| |