| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3579 |
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| Symbol | |
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| ID | 5191674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3995099 |
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| End bp | 3995806 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640588034 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_001268887 |
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| Protein GI | 148548785 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0247116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAGGA TCGGTGCCAG TGTGATCGAA CGAGTCACCC AGGCCTGTGT CTGTGCCAGC
ATGCTGCTGG CGCCCGTGGC AGCCACCCAG GCCGCCACCG AGGAAGATCC CTGGGAAGCG
GTCAACCGCC CGATCTTCCG CTTCAACGAT ACCCTCGACA CCTATGCCCT CAAACCATTG
GCCAAGGGCT ACCAAGCGGT CACTCCACAG TTCCTCGAAG ATGGCATCCA CAACATCTTT
CGCAACCTGG GGGACGTGAC CAACCTGGCC AACGACGTGC TGCAGCTCAA GCCGCATGCG
GCGGGCGTGG ATACGGCGCG GTTGATCGTC AATACCACCT TCGGCCTGGG TGGCTTCTTC
GATGTGGGTA CCAAGATGGG CCTGCAGCGC AACGACGAGG ACTTTGGCCA GACCCTGGGC
TACTGGGGGG TGCCGAGCGG GCCGTATGTG GTCATCCCGC TGCTGGGCCC AAGCACCGTG
CGTGACGGTG TGGCCAAGTA CCCGGACACC TATACCAAAC CCTATCGCTA CATCGACCAC
GTGCCTACGC GCAACTCGAT CTTTGCGCTG GACCTGATCG ACACCCGCGC CAGCCTGCTC
TCGGCCGAAA AGCTGATTCA GGGTGACAAG TACATCTTCA TTCGTAATGC CTACCTGCAA
AACCGCGAGT TCAAGGTGAA GGATGGCGAG GTCGAAGACG ACTTCTGA
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| Protein sequence | MRRIGASVIE RVTQACVCAS MLLAPVAATQ AATEEDPWEA VNRPIFRFND TLDTYALKPL
AKGYQAVTPQ FLEDGIHNIF RNLGDVTNLA NDVLQLKPHA AGVDTARLIV NTTFGLGGFF
DVGTKMGLQR NDEDFGQTLG YWGVPSGPYV VIPLLGPSTV RDGVAKYPDT YTKPYRYIDH
VPTRNSIFAL DLIDTRASLL SAEKLIQGDK YIFIRNAYLQ NREFKVKDGE VEDDF
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