| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3576 |
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| Symbol | |
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| ID | 5193493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3992834 |
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| End bp | 3993316 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640588031 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001268884 |
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| Protein GI | 148548782 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00186443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCG GTAGAATTCA GTTCGCCGAG CAGAGCGGTA CCTTCGTACT GAAATTCGTT
GGTGAAGTGC GCCTGACCCT GTGTTCGGCG CTGGACGCGA CGATCGAGAA GATTTTCACT
GCGCTGAACT TCTCGGCGAT TGTCATCGAC CTGACTGAAA CCGAGAGTAT CGACAGCACC
ACGCTGGGCC TGCTGGCGAA GCTGTCGATC CTGTCGCGGC AGAAGGTGGG CCTGCTGCCG
ACGGTGGTGA CTACCAATCC GGACATTTCA CGGCTATTGC AGTCGATGGG TTTCGATCAG
GTGTTCAACA TTGTCGATCG GCCGATTCCC TGCACCGATT GCCTGACCGA CTTGCCGTCG
CAGGACCAGA ATGAAGAGGT GGTGCGCTCC AAGGTGCTGG AGGCGCACAA GATCCTCATG
GGCCTGAATG ACTCCAACCG CGAAGCCTTC CATGATCTGG TCAATGCGCT GGAGCGGGGC
TGA
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| Protein sequence | MSTGRIQFAE QSGTFVLKFV GEVRLTLCSA LDATIEKIFT ALNFSAIVID LTETESIDST
TLGLLAKLSI LSRQKVGLLP TVVTTNPDIS RLLQSMGFDQ VFNIVDRPIP CTDCLTDLPS
QDQNEEVVRS KVLEAHKILM GLNDSNREAF HDLVNALERG
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