Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3574 |
Symbol | |
ID | 5191159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3989729 |
End bp | 3990655 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640588029 |
Product | transaldolase B |
Protein accession | YP_001268882 |
Protein GI | 161936355 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.372751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCA AGCTGGAACA ACTCAAGCAG TTCACCACCG TGGTCGCCGA CACCGGGGAC CTGGACGCCA TCACCCGCCT GAAGCCGGTC GATGCCACCA CCAACCCGTC GCTGCTGCTC AAGGCTGCTG CCATCCCGGG CTACGCCGAC CTGCTCAAGC AGGTGAAGGC CGACGCCAAG GGTGATGTCG ACCTGGCCTG CGACAAGTTT GCGGTGGCGG TAGGCTCGGG CATTCTCAAG GTCATCCCGG GGCGTATCTC CACCGAGGTG GATGCACGCC TGTCGTTCGA TGAGCCAGCC CTGCTGAACA AGGCCCGTCA GCTGATCGCC CTGTACGAGG CGGCCGGAGT GGCAAAAGAG CGTGTGCTGA TCAAGCTGGC CTCCACCTGG GAAGGCATTC GCGCCGCCGA AAAGCTGGAA AAGGAAGGCA TCCAGACCAA CCTGACCCTG CTGTTCTCCT TCGCCCAGGC CCAGGCTTGC GCCGATGCCG GGGTGTTTTT GATTTCGCCG TTCGTGGGCC GTATCTACGA CTGGTACAAG AAGAGCACCG GCCAGGAATA CGTGGGCGCC GAGGACCCAG GCGTGCAGTC GGTCACGCGC ATCTACAACT ACTACAAGGC CAATGGTTAC AACACTGTGG TCATGGGCGC CAGCTTCCGC AATATCGGCC AGATCGAACA ACTGGCCGGC TGTGACCGCC TCACCATCAG CCCCGAGCTG CTGCAGCAGC TGAGTGATGA CCAGGGTGAG TTGCCGCAGG TGCTGAAACC GGGCAACGCC GGTGAAGCCA AGCAGCACCT GAACGAAAGC CAGTTCCGTT GGGCGATGAA CGAAGACGCC ATGGGCACCG AGAAGCTGGC CGAAGGTATC CGCCAGTTTG CGCGGGACCA GGAAAAGCTG GAGAAGTTGA TGGCTGAAAA GGCCTGA
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Protein sequence | MTSKLEQLKQ FTTVVADTGD LDAITRLKPV DATTNPSLLL KAAAIPGYAD LLKQVKADAK GDVDLACDKF AVAVGSGILK VIPGRISTEV DARLSFDEPA LLNKARQLIA LYEAAGVAKE RVLIKLASTW EGIRAAEKLE KEGIQTNLTL LFSFAQAQAC ADAGVFLISP FVGRIYDWYK KSTGQEYVGA EDPGVQSVTR IYNYYKANGY NTVVMGASFR NIGQIEQLAG CDRLTISPEL LQQLSDDQGE LPQVLKPGNA GEAKQHLNES QFRWAMNEDA MGTEKLAEGI RQFARDQEKL EKLMAEKA
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