Gene Pput_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3574 
Symbol 
ID5191159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3989729 
End bp3990655 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content62% 
IMG OID640588029 
Producttransaldolase B 
Protein accessionYP_001268882 
Protein GI161936355 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.372751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCA AGCTGGAACA ACTCAAGCAG TTCACCACCG TGGTCGCCGA CACCGGGGAC 
CTGGACGCCA TCACCCGCCT GAAGCCGGTC GATGCCACCA CCAACCCGTC GCTGCTGCTC
AAGGCTGCTG CCATCCCGGG CTACGCCGAC CTGCTCAAGC AGGTGAAGGC CGACGCCAAG
GGTGATGTCG ACCTGGCCTG CGACAAGTTT GCGGTGGCGG TAGGCTCGGG CATTCTCAAG
GTCATCCCGG GGCGTATCTC CACCGAGGTG GATGCACGCC TGTCGTTCGA TGAGCCAGCC
CTGCTGAACA AGGCCCGTCA GCTGATCGCC CTGTACGAGG CGGCCGGAGT GGCAAAAGAG
CGTGTGCTGA TCAAGCTGGC CTCCACCTGG GAAGGCATTC GCGCCGCCGA AAAGCTGGAA
AAGGAAGGCA TCCAGACCAA CCTGACCCTG CTGTTCTCCT TCGCCCAGGC CCAGGCTTGC
GCCGATGCCG GGGTGTTTTT GATTTCGCCG TTCGTGGGCC GTATCTACGA CTGGTACAAG
AAGAGCACCG GCCAGGAATA CGTGGGCGCC GAGGACCCAG GCGTGCAGTC GGTCACGCGC
ATCTACAACT ACTACAAGGC CAATGGTTAC AACACTGTGG TCATGGGCGC CAGCTTCCGC
AATATCGGCC AGATCGAACA ACTGGCCGGC TGTGACCGCC TCACCATCAG CCCCGAGCTG
CTGCAGCAGC TGAGTGATGA CCAGGGTGAG TTGCCGCAGG TGCTGAAACC GGGCAACGCC
GGTGAAGCCA AGCAGCACCT GAACGAAAGC CAGTTCCGTT GGGCGATGAA CGAAGACGCC
ATGGGCACCG AGAAGCTGGC CGAAGGTATC CGCCAGTTTG CGCGGGACCA GGAAAAGCTG
GAGAAGTTGA TGGCTGAAAA GGCCTGA
 
Protein sequence
MTSKLEQLKQ FTTVVADTGD LDAITRLKPV DATTNPSLLL KAAAIPGYAD LLKQVKADAK 
GDVDLACDKF AVAVGSGILK VIPGRISTEV DARLSFDEPA LLNKARQLIA LYEAAGVAKE
RVLIKLASTW EGIRAAEKLE KEGIQTNLTL LFSFAQAQAC ADAGVFLISP FVGRIYDWYK
KSTGQEYVGA EDPGVQSVTR IYNYYKANGY NTVVMGASFR NIGQIEQLAG CDRLTISPEL
LQQLSDDQGE LPQVLKPGNA GEAKQHLNES QFRWAMNEDA MGTEKLAEGI RQFARDQEKL
EKLMAEKA