Gene Pput_3565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3565 
Symbol 
ID5192654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3982649 
End bp3983623 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content59% 
IMG OID640588021 
Producthypothetical protein 
Protein accessionYP_001268874 
Protein GI148548772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.28529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGG GCTTGTTAGC GGCCATTGCT GCCACCTTTT CCTGGTCACT GCTCTACATC 
TTTCCGGGGC TGGTCGGTGA CTACAGCCTT TTTGACCTGG CGGTGGTGAG CTATGCCTTT
GCCGGGTTAG GTAGCCTGCT GGTGCTGTTC GTTTACCGTA GCGCAGTGCG GCAATTGCGA
CTGATTGACT GGGCCTGTGC CGCACTGCTG GGCTTCTTGG GATACATTGG CTACTTCTTC
CTGATCACCA CTGCGGTCTT GGCAGCCGGG CCGGTGATCC CTCCGGTGAT GATGGGATCG
GTACCGATCG TGCTTGCGAT TGCCGGCAAC CTGCGCAGTG CCAGCGTGCC CTGGCGCGCC
ATTGCCGGGC CACTGCTGGT GGCGGGTCTG GGCATCAGCC TGGTCAATCT GAGCGTGTTT
GATGCTAGCC GTGCGGCGGC AGTGCTCCCA ACCGCATCGT TACTGCTTGG GCTGCTTGCA
TCGTTGCTGG CAATCGCATT CTGGACCGGT TTTGGTCTAT TGAATGAAAG TGCGTTGGCT
CGACGCCCAA GCATGTCTCC CATGTTGTGG TCAGCCATGT TGATCTTCAT GTGCAGCGTC
GAAATGCTGG CGTTCATCCC GGTCGGGCTG TACTTGAAAC TGTCTCATTT CGCTAGCCAT
CCGAGCGGAT TGGCAGGTAC TCAGGCGCTG ATCGTCTGTG GGTTGATTCA GGGGTTAGGG
GCCACCCTTG CAGGTGCCTG GGCATGGTCA ATCGCAACGC GGCGTCTACC GCTGGCGCTG
AGCGGGCAAT TGATCGCCAG CGGATCCATT TATGCAACTA CGATGGGCCT GCTCATCAAC
CAACGCTGGC CGTCTCCTAT GGAAGCGCTT GGAACAGGCT TGTTGTTCGT CGGGGTGGTG
TGGGCTATTC ACGCCTTTTA CCGCAAGCAA ACACGCCTCC AGGCGCATGG CGAGGCATCC
AGGGTACGTA TCTGA
 
Protein sequence
MTLGLLAAIA ATFSWSLLYI FPGLVGDYSL FDLAVVSYAF AGLGSLLVLF VYRSAVRQLR 
LIDWACAALL GFLGYIGYFF LITTAVLAAG PVIPPVMMGS VPIVLAIAGN LRSASVPWRA
IAGPLLVAGL GISLVNLSVF DASRAAAVLP TASLLLGLLA SLLAIAFWTG FGLLNESALA
RRPSMSPMLW SAMLIFMCSV EMLAFIPVGL YLKLSHFASH PSGLAGTQAL IVCGLIQGLG
ATLAGAWAWS IATRRLPLAL SGQLIASGSI YATTMGLLIN QRWPSPMEAL GTGLLFVGVV
WAIHAFYRKQ TRLQAHGEAS RVRI