Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3565 |
Symbol | |
ID | 5192654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3982649 |
End bp | 3983623 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640588021 |
Product | hypothetical protein |
Protein accession | YP_001268874 |
Protein GI | 148548772 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.28529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTGG GCTTGTTAGC GGCCATTGCT GCCACCTTTT CCTGGTCACT GCTCTACATC TTTCCGGGGC TGGTCGGTGA CTACAGCCTT TTTGACCTGG CGGTGGTGAG CTATGCCTTT GCCGGGTTAG GTAGCCTGCT GGTGCTGTTC GTTTACCGTA GCGCAGTGCG GCAATTGCGA CTGATTGACT GGGCCTGTGC CGCACTGCTG GGCTTCTTGG GATACATTGG CTACTTCTTC CTGATCACCA CTGCGGTCTT GGCAGCCGGG CCGGTGATCC CTCCGGTGAT GATGGGATCG GTACCGATCG TGCTTGCGAT TGCCGGCAAC CTGCGCAGTG CCAGCGTGCC CTGGCGCGCC ATTGCCGGGC CACTGCTGGT GGCGGGTCTG GGCATCAGCC TGGTCAATCT GAGCGTGTTT GATGCTAGCC GTGCGGCGGC AGTGCTCCCA ACCGCATCGT TACTGCTTGG GCTGCTTGCA TCGTTGCTGG CAATCGCATT CTGGACCGGT TTTGGTCTAT TGAATGAAAG TGCGTTGGCT CGACGCCCAA GCATGTCTCC CATGTTGTGG TCAGCCATGT TGATCTTCAT GTGCAGCGTC GAAATGCTGG CGTTCATCCC GGTCGGGCTG TACTTGAAAC TGTCTCATTT CGCTAGCCAT CCGAGCGGAT TGGCAGGTAC TCAGGCGCTG ATCGTCTGTG GGTTGATTCA GGGGTTAGGG GCCACCCTTG CAGGTGCCTG GGCATGGTCA ATCGCAACGC GGCGTCTACC GCTGGCGCTG AGCGGGCAAT TGATCGCCAG CGGATCCATT TATGCAACTA CGATGGGCCT GCTCATCAAC CAACGCTGGC CGTCTCCTAT GGAAGCGCTT GGAACAGGCT TGTTGTTCGT CGGGGTGGTG TGGGCTATTC ACGCCTTTTA CCGCAAGCAA ACACGCCTCC AGGCGCATGG CGAGGCATCC AGGGTACGTA TCTGA
|
Protein sequence | MTLGLLAAIA ATFSWSLLYI FPGLVGDYSL FDLAVVSYAF AGLGSLLVLF VYRSAVRQLR LIDWACAALL GFLGYIGYFF LITTAVLAAG PVIPPVMMGS VPIVLAIAGN LRSASVPWRA IAGPLLVAGL GISLVNLSVF DASRAAAVLP TASLLLGLLA SLLAIAFWTG FGLLNESALA RRPSMSPMLW SAMLIFMCSV EMLAFIPVGL YLKLSHFASH PSGLAGTQAL IVCGLIQGLG ATLAGAWAWS IATRRLPLAL SGQLIASGSI YATTMGLLIN QRWPSPMEAL GTGLLFVGVV WAIHAFYRKQ TRLQAHGEAS RVRI
|
| |