| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3560 |
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| Symbol | |
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| ID | 5192246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3978662 |
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| End bp | 3979216 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588016 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001268869 |
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| Protein GI | 148548767 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.444346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAGAC ACGAAGAGGT TGAAGCCCTC GCGATCCTTA TTCACGACCT GCGCAAATTC
AAGAACCTGA CCTTGGGTGA ACTGGCCGAG CGCATCAACC GCTCGGTGGG TTTCCTCTCC
CAGGTAGAAC GCGGCGTTTC GCGCCCGACC GTGGCAGACC TCACCGCTAT CAGCGAAGCG
CTCGGCGTAT CAACCGCGTA CTTCTACAAC CTGAGCAAGC CCCGCAGCAT TGGCTGGGTC
ACGCGCCCCC ACGAGCGGCG CACGTTGTAC CTGGAATCGG GCATTACCGA CGTGCTGGCT
TCGCCGACCA TCGCAGGCGC CTTCTCCATG CTCGACAGCC TTCTCGAGCC GGGCGCCACC
AGTGGGGAGG CGTACTTGAG CGACCGTTCC GAGCAGGGCT GTTTCGTGCT CGAGGGCGAA
CTCACGGTGT GGCTGGACCA GGGCGATGCC GTGACCCTGC AAGCCAACGA CTGCTTCCAG
CTGCAACCCC ATGCGCCGTT CCGTTACGCC AACCTGACGG ATAGAACCAC CCGTGTGCTC
TGGGTCTTCA ATTGA
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| Protein sequence | MKRHEEVEAL AILIHDLRKF KNLTLGELAE RINRSVGFLS QVERGVSRPT VADLTAISEA
LGVSTAYFYN LSKPRSIGWV TRPHERRTLY LESGITDVLA SPTIAGAFSM LDSLLEPGAT
SGEAYLSDRS EQGCFVLEGE LTVWLDQGDA VTLQANDCFQ LQPHAPFRYA NLTDRTTRVL
WVFN
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