| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3557 |
|---|
| Symbol | |
|---|
| ID | 5195438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3975015 |
|---|
| End bp | 3976373 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640588013 |
|---|
| Product | putative aminotransferase |
|---|
| Protein accession | YP_001268866 |
|---|
| Protein GI | 148548764 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.936496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAC AGAATTCGCA GACCCTTGCC TGGCAAACCA TGAGCCGCGA CCATCACCTG
GCCCCGTTCA GCGATGTCAG GCAACTGGCC GAGAAAGGCC CGCGCATCAT CACCTCGGCC
AAGGGCGTGT ACCTGTGGGA CAGCGAGGGC AACAAGATTC TCGATGGCAT GGCCGGCCTG
TGGTGCGTAG CGGTCGGCTA TGGTCGCGAT GAGCTGGCCG ATGTCGCCAG CCAGCAGATG
AAGCAGTTGC CTTACTACAA CCTGTTCTTC CAGACCGCGC ACCCGCCCGC GCTGGAGCTG
GCCAAGGCGA TCGCCGAGGT GGCCCCGCAA GGCATGAACC ACGTGTTCTT CACCGGCTCC
GGCTCCGAAG GCAACGATAC CGTGCTGCGC ATGGTCCGCC ATTACTGGGC TCTGAAGGGC
CAGAAGAACA AGAAGGTCAT CATTGGCCGC ATCAACGGCT ACCACGGCTC TACCGTGGCG
GGCGCGGCCT TGGGCGGCAT GAGTGGCATG CACCAGCAGG GCGGGGTGAT TCCGGATGTC
GTGCACATCC CGCAGCCGTA CTGGTTTGGC GAAGGCGGTG ACATGACCGA GGCCGACTTC
GGCGTGTGGG CGGCCGAGCA ACTGGAGAAG AAGATCCTCG AAGTTGGCGT GGACAACGTC
GCCGCCTTCA TCGCCGAGCC GATCCAGGGC GCCGGTGGCG TGATCATTGC GCCGCAGACC
TATTGGCCGA AGATCAAGGA AATCCTGGCC AGGTACGACA TCCTCTTCGT CGCCGACGAA
GTGATCTGCG GGTTCGGCCG TACCGGTGAG TGGTTCGGCA CCGATTATTA CGACCTCAAG
CCTGACCTGA TGACCATCGC CAAGGGCCTG ACCTCCGGTT ACATCCCCAT GGGCGGGGTG
ATCGTGCGTG ACGAGGTGGC CAAGGTGATC AGCGAAGGCG GCGACTTCAA CCACGGCTTC
ACCTATTCCG GCCACCCGGT GGCGGCAGCG GTGGGCCTGG AGAACCTGCG GATCCTGCGT
GACGAGCAGA TCATCCAGCA GGTGCACGAT AAAACCGCGC CTTATCTGCA ACAACGCCTG
CGCGAACTGG CCGACCACCC GCTGGTAGGC GAAGTGCGCG GCCTGGGCAT GCTCGGTGCG
ATCGAGTTGG TGAAAGACAA GGCCACCCGG GCCCGTCATG AAGGCAAAGG TGTCGGCATG
ATCTGTCGCC AGCACTGCTT CGACAACGGC CTGATCATGC GCGCTGTAGG CGACACCATG
ATCATCGCGC CACCGCTGGT GATCAGTATC GAAGAGATCG ACGAACTGGT GGAGAAAGCC
CGCAAGTGCC TGGACCTGAC CTATGAGGCT GTTCGGTAA
|
|---|
| Protein sequence | MSEQNSQTLA WQTMSRDHHL APFSDVRQLA EKGPRIITSA KGVYLWDSEG NKILDGMAGL
WCVAVGYGRD ELADVASQQM KQLPYYNLFF QTAHPPALEL AKAIAEVAPQ GMNHVFFTGS
GSEGNDTVLR MVRHYWALKG QKNKKVIIGR INGYHGSTVA GAALGGMSGM HQQGGVIPDV
VHIPQPYWFG EGGDMTEADF GVWAAEQLEK KILEVGVDNV AAFIAEPIQG AGGVIIAPQT
YWPKIKEILA RYDILFVADE VICGFGRTGE WFGTDYYDLK PDLMTIAKGL TSGYIPMGGV
IVRDEVAKVI SEGGDFNHGF TYSGHPVAAA VGLENLRILR DEQIIQQVHD KTAPYLQQRL
RELADHPLVG EVRGLGMLGA IELVKDKATR ARHEGKGVGM ICRQHCFDNG LIMRAVGDTM
IIAPPLVISI EEIDELVEKA RKCLDLTYEA VR
|
|---|
| |