Gene Pput_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3554 
Symbol 
ID5192540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3972749 
End bp3973231 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content65% 
IMG OID640588010 
Productformate dehydrogenase subunit gamma 
Protein accessionYP_001268863 
Protein GI148548761 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATG AATTGCTCCA CCTGCCTGTA ATCCAGCGCA TTCTGGCCCG CGACAAGGAC 
ACCCCCGGTG CCCTGTTGCC GATCCTGCAT GCCGTCCAGC ACGAGATAGG TTACATCCCC
GATGCCTCGG TCCCCGAAAT CGCCCATGCC CTGAACCTCA GCCTGGCTGA AGTGCGTGGG
GTAATCAGCT TTTATCACGA CTTCCGCACC GCGCCGCCCG CTCGCCATAC CCTGCGCCTG
TGCCGTGCCG AGTCGTGCCA GAGCCGTGGC GCCGAAGCCC TGGCCGCGCA ATTGCGTGAA
CAGTTGGCAC TGGACGACCA CGGCACCAGC GCCGACGGCG CCATCAGCCT GCGCCCTGTT
TATTGCCTGG GTGCCTGTGC CTGTTCGCCA GCGCTGGAGC TGGACGGCCA GGTGCACGCG
CGCCTCACCC CTGAGCGCCT GCGGGACTTG GTCAACGGTT GCCGGGAGGA CTCAGCATGC
TGA
 
Protein sequence
MPDELLHLPV IQRILARDKD TPGALLPILH AVQHEIGYIP DASVPEIAHA LNLSLAEVRG 
VISFYHDFRT APPARHTLRL CRAESCQSRG AEALAAQLRE QLALDDHGTS ADGAISLRPV
YCLGACACSP ALELDGQVHA RLTPERLRDL VNGCREDSAC