Gene Pput_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3548 
Symbol 
ID5191743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3965917 
End bp3966345 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID640588004 
Productprotein of unknown function DUF883, ElaB 
Protein accessionYP_001268857 
Protein GI148548755 
COG category[S] Function unknown 
COG ID[COG4575] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTA TCTTACACCC AGGCACAGCA TCACCGGAAA GTCGCCGCAA CTTTCCCGAC 
GTGGCGGCAT CCATTGTTCA CATCACCCCC ATTGACGAGG ACGAGTTCAT GGCCCGGAAA
AACGCCACGC TGGCGGACAG CGATCAGATC AAGGACCAGG TATTCAGCGA ACTGCAATCG
CTGATAGAAG AATCGGAAAA ACTGCTGAAC GACAGTGCCG CACTGGTCGG CGAAGAAGCA
GAGACGTTGC GCGCCCAGGT GAGCCTGAAG CTGCGCCAGG CACGCCAGGC GGCGAGCAAC
GTGCGCAGCA AGGCGCAACC GGTGGTGGAC GCCACTCAGG ACTACATCGG CGGCCACCCC
TGGCAGACCG TGGCCATTTC CGCCGGCCTC GGGTTGGCGG TAGGCCTGCT ACTGGGTCGG
CGCAGTTAA
 
Protein sequence
MAAILHPGTA SPESRRNFPD VAASIVHITP IDEDEFMARK NATLADSDQI KDQVFSELQS 
LIEESEKLLN DSAALVGEEA ETLRAQVSLK LRQARQAASN VRSKAQPVVD ATQDYIGGHP
WQTVAISAGL GLAVGLLLGR RS