| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3544 |
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| Symbol | |
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| ID | 5191911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3961221 |
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| End bp | 3963647 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588000 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001268853 |
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| Protein GI | 148548751 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGC CCTTGCACCG CCGTCGCGGT CCTTTTCACC ATGCCTTGAT GTCTTGCAGT
GCCATGGCCC TGTTGCTCGG CCCCCTGCAC GCAGGGGCCG CGACGACTGC CGAACAGACC
CAGATGCAAG CTCGCCAGGT CCAGCTCGAC CTGCCAGCCC AGCCGCTGGA CCAGGCGCTG
ACCACCTTCG CCGACCAAGC CGGCCTGCAC CTGCTGTACA CCACAGGCGA TGTCGCCGGC
CAGGTCAGCC CGGCGTTGCA GGGCAACTAC AGTGTCGAGC AGGCCCTGCA GCAGTTGTTG
GCCGGCAGCG GCATGAGCTG GCAGTTCAGC GAGGCTCGCA CCGTCACCCT GCGCAAGGCC
GAGGCCGCGC CGCAGGCGGT CAACCTCAAG CCGATCGAAG TCAGCGTAGC CTCGCGCACC
AGCACCGCCA TCAGCGAAAT CCCTGGGACC GTCTGGGTGG TCGACCAGCA GCAATTGCGC
GAGCAGATCG ACAGCGGCGT CAGCCTGAAG GAAGCCATTG GCAAGCTGGT ACCGGGCCTT
GACCTGGCGC CGGAAGGGCG CACCAATTAC GGCCAGAACA TGCGTGGGCG CAACGTGCTG
GTGATGATCG ACGGGGTCAG TCAGAACAGC TCCCGCGGCC TGTCGCGCCA GTTCGACAGC
ATTTCACCGT TCAACGTCGA GCGCGTCGAA GTGCTGTCTG GCGCCAGCGC CATCTACGGC
GGTGGCGCCA CTGGCGGCAT CATCAACATC GTGACCAAAA AGGGCGAGCC TGGCCCGGCG
CGCTTCGAGA CCCAGTTGGG GGCCAGCAGC GGTTTCAACA ACAGCGACGA CCTGGCCACC
CGCTTCGCCC AGTCGGTCAG CGGCGGCAAC GAACGGGTCA ATGCCCGGTT GGGCGTTTCC
GGTGAGCAGA ACGAAGCCTT CTACGATGGT GCTGGCGACC AGATTTTCAT CGACAACACC
CAGACCGACC TGCAGTACAA CCGCACCATC GACGTACTCG GTACCTTGGG CCTGCAGCTG
AACGACCAGC AGAGCCTCGA CCTGTTGGCC CAGTACTACG ACTCGGGCAA CCACGGCAGC
ACGGGTATCT ACTTCCCCAA CCTGAACTAC AACGCGCCAT CCGACCTGGA AGACGCCGAG
CTGCGCAGCG GTTATTCATC GGACCTGGAG CCGCGTACGC GGCGCTTGCT GCTCAACGCC
AATTACCACC ACACCGACGT GCTGGGCCAG GACTTCTACC TGCAGGCCTC GTACCGCAAG
GAAGACGACA ACTTCTACCC GTTCCCGTAC TACAACCGTG CCACGCCCAC CGGCTCGCGC
GGGGTGTACT TTGCCGCCTC GCAGCAGAAC TTCGAAGTCA CCAGCCTCAA GGGCCTGTTT
GCCAAACAGT GGGATACGCT GAAGCTGACC TACGGCGTCG ACCTGGACCG CGAGCGCTTC
AATGCCGAGC AAACCACCTT CAACGCCCAG ACCTCGTCTG AGTCGGGTGG CCTTGAGCTG
GAAAAAGACA GCAAGGCCGC ACGCTACCCC AGCTACCGGG TGGATGGTGT GTCGGTGTAT
GCCCAGCTGG ACTGGCATGC CACCGACAAC CTGACATTGT CCGGTGGTGC CCGGCGCCAG
CAGATGGACG TGGATGTCAG CGACTTCAAG GGCGTGCCAG GTGGCAGTAA CGACTATCAG
GTCAACCTGT TCAACATCGG TGCCATCTAC GACTTCAAGA ACGGCCACCA GGTGTGGAGC
AACTATGGCG AAGGCTTCGA CCTGCCTGAC CCGGCCAAGT ACTACGGCAA GCCGGGTCTG
AGCGTGGCCG ATAACCCGTT GGCCGGTATC AAGAGCCGCC AGGTGGAAGT GGGCTGGCGC
TATGCCGACC TGGATTGGGA TGCACAGGCA GCGCTGTACT ACATCTGGTC GGACAAGATC
ATCAACGTCG ATTCGCAAAC GCTGACCATC GACGTGGAAG AGCAGAAAAG CCGCGACTTC
GGCTTTGAAG GTGCACTGAC TCGGCACTTC CAGACCGGCT GGGAAGCTGG CGGCACATTG
CACATGACAC GCTCCGAGGA AGAGGCCGAG GACGGCGGCT GGATCAAGCG CGATGCCCGT
TATGCCTCGT TGTCCAAGGC CACCGCGTTT GTCGGCTGGA AGGGCGATGG CCGCAGTGCA
CGCTTGCAGG CCAACCATGC CTTCAGCCTG AAGGACGATG CCGATCACGA GATTGACGGC
TACACCACCT TCGACCTGCT GGGCAGCCAG GACACCGGTT TCGGCACCGT CAGTGCCGGT
ATCCAGAACC TGCTGGACAA GCAGTACAGC ACGGTATGGG GACAGCGTGC GACGTTGTTC
TATTCGCCGA CCTACGGGCC GGCGTATCTG TATGACTACC AGGGGCGCGG GCGGACCTAC
ACCCTGACCT GGAGCATGGC TTACTGA
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| Protein sequence | MLKPLHRRRG PFHHALMSCS AMALLLGPLH AGAATTAEQT QMQARQVQLD LPAQPLDQAL
TTFADQAGLH LLYTTGDVAG QVSPALQGNY SVEQALQQLL AGSGMSWQFS EARTVTLRKA
EAAPQAVNLK PIEVSVASRT STAISEIPGT VWVVDQQQLR EQIDSGVSLK EAIGKLVPGL
DLAPEGRTNY GQNMRGRNVL VMIDGVSQNS SRGLSRQFDS ISPFNVERVE VLSGASAIYG
GGATGGIINI VTKKGEPGPA RFETQLGASS GFNNSDDLAT RFAQSVSGGN ERVNARLGVS
GEQNEAFYDG AGDQIFIDNT QTDLQYNRTI DVLGTLGLQL NDQQSLDLLA QYYDSGNHGS
TGIYFPNLNY NAPSDLEDAE LRSGYSSDLE PRTRRLLLNA NYHHTDVLGQ DFYLQASYRK
EDDNFYPFPY YNRATPTGSR GVYFAASQQN FEVTSLKGLF AKQWDTLKLT YGVDLDRERF
NAEQTTFNAQ TSSESGGLEL EKDSKAARYP SYRVDGVSVY AQLDWHATDN LTLSGGARRQ
QMDVDVSDFK GVPGGSNDYQ VNLFNIGAIY DFKNGHQVWS NYGEGFDLPD PAKYYGKPGL
SVADNPLAGI KSRQVEVGWR YADLDWDAQA ALYYIWSDKI INVDSQTLTI DVEEQKSRDF
GFEGALTRHF QTGWEAGGTL HMTRSEEEAE DGGWIKRDAR YASLSKATAF VGWKGDGRSA
RLQANHAFSL KDDADHEIDG YTTFDLLGSQ DTGFGTVSAG IQNLLDKQYS TVWGQRATLF
YSPTYGPAYL YDYQGRGRTY TLTWSMAY
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