| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3543 |
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| Symbol | |
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| ID | 5192597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3959776 |
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| End bp | 3960732 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587999 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001268852 |
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| Protein GI | 148548750 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.319397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCG GGTTACATTG CACAAATGGC AAGTTTGCAA AGCTGACATT CATCAGGAGC
AATGTAATGC TCGGACAAGT GCACGACCCC GACCTGCACC TGCTGCGGCT GTTCGTCACT
GTAGTCGAGG CGGGTGGCTT CAGCGCCGCT CAAGGCGTGC TGGGCCTGAG CCAGCCCACC
ATCAGCCAGC GCATGGCGCA ACTGGAGACA CGCGTGGGTT ACCGCCTGTG CAGCCGCGGC
AAGGGTGGTT TTCGCCTGAC GGAAAAAGGT GAATTGCTAT TGGACGCGGC GCATGGGCTA
CTGCTGAACA TTGAGCAGTT TCGCCAGCAG GCCAACGGCG TTGCCGGGCG GCTGCTGGGA
ACTGTGCGCA TAGGCATGGC GGAAAATCAG GACAAGGCGG TGAGCCTGAA ACTGGCGGCG
GCCATTGCGG CATTTCGCAG GCGAGAAGAA TCGGTGCAAC TGGAGCTTGT CAGTGCACCG
CCGGCGGAGC TGGAACGGCT GTTGCTGGAG CAGCGGTTGG ACTATGCCAT CAGCTATTTT
TCCGGCAACC AGGCGGCCTT TGATTACCAG CCCTTGTTCG CGGAGCGCCA GCGGCTGTAT
TGCGGCAAGG GGCATGTGCT GTATGGGGAA ACGGATGTTG GGCTTGAGCA GTTGCTGGAC
ATGGACCAGG TGCGCCATCC GTACCGTTTT CTCAAAGGGG GCGAGCCGTT CCAAAGCAGA
CGCAGCACGG CAGTGGCGGA GCAGATCGAA AGCGTGCTGA CGTTCATTCT GTCTGGGCGG
CATATTGGCT ACTTGCCATG CCACTGTGCA CAGGGCTGGG AGGCCGAGGG GCTGTTATGG
GCGCTGGACC CTGAGCTTGA TTTTGGGGTG CCGTTCACCC TGGCCCGGCA CCGGGCACAG
GGGGTTGGCG AGGCAGCCCA TGTATTTGCG CAGGATTTGC TGGCGGCGTT TGCCTGA
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| Protein sequence | MPAGLHCTNG KFAKLTFIRS NVMLGQVHDP DLHLLRLFVT VVEAGGFSAA QGVLGLSQPT
ISQRMAQLET RVGYRLCSRG KGGFRLTEKG ELLLDAAHGL LLNIEQFRQQ ANGVAGRLLG
TVRIGMAENQ DKAVSLKLAA AIAAFRRREE SVQLELVSAP PAELERLLLE QRLDYAISYF
SGNQAAFDYQ PLFAERQRLY CGKGHVLYGE TDVGLEQLLD MDQVRHPYRF LKGGEPFQSR
RSTAVAEQIE SVLTFILSGR HIGYLPCHCA QGWEAEGLLW ALDPELDFGV PFTLARHRAQ
GVGEAAHVFA QDLLAAFA
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