| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3542 |
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| Symbol | |
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| ID | 5192596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3958660 |
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| End bp | 3959739 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587998 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001268851 |
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| Protein GI | 148548749 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGAT CGTTGTGCCT TTTGTCTCTG GTTCTGGCCC TGCCGCTGCA GGCCGAAGAA
AAGGTCGTCA ATCTCTACAG CTGGGCCGAT TACGTCGCCC CGCAAACCCT GCAGCGCTTC
GAACAGGAAA CGGGCTACAA GGTGCGTTAC GACACCTTTG ACACCCCCGA GGTGCTGGAA
ACCAAGCTGT TGACCGGTGG TAGCGGCTAC GACGTGGTGG TGCCGTCATC CACCGTGCTG
GCCCGGGCGC TCAAGGCCAA TGCCCTGCAA CCGCTGGACG CTCAGGCCAT GCCTGGCTAT
GGCAACCTCG ACAAGGACCT GCTGGGCAAA CTGGCCGAGG TTGACCCCGG CAACCGCCAT
GCTGTGCCGT ACACCTGGGG CACGCTGGGC CTGGGGGTAA ATGTGGAGGC AGTACGCCAG
CGCCTTGGCG ATGTACCGCT GGACAGCCTC GACCTGTTGT TCAAGCCCGA GTACGCCACC
CGCCTGAAGG GTTGCGGCAT CGCTTTGCCT GACTCGCCCC AGGAGGTGAT CGGCGTAGCC
CTGAACTACC TGGGCAAGGA CCCTTACAGC CAGAACAAGG ATGACCTGGC TGCCGCGCAG
AACCTGCTCA GCCAGTTGCA GCCGTCGGTC AGCTACGTTG CCAACGGCCG GCAGATCAAC
GACCTGGCCA ATGGCAGCGT GTGCCTGGCG CTGACCTACA ACGGTGATGC CGCGATGGCC
GCCGACCAGG CCCGCCGTGC CGGCAAGCCG TTCGAGGTGA TCTACCGCAT CCCCCGCGAA
GGCACGCTGG TATGGCAGGA CAACCTGGTC ATCCCCAAGG ACGCCCCGCA CCCCGAGGCC
GCACGGGCGT TCATCGCCTT CATGCTCAAG CCAGAGTCGG TGGCAGCGCT GACCAACACG
CTGTTCTTCG CCAATGCCAA CCAGGCTGCC ACGCCGCTGG TGGACGAAGC GGTGCGCAAC
GACCCGGATA TCTATCCGTC GGCCGAGGTG CGTCAGCGCC TGTATGCCGA CCGCAGCATG
GCCTTGGCCG ACCTGCGCCA ACGCAACCGT CTGTGGACCG CCTTCCGCAG CCGGCAGTAG
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| Protein sequence | MRRSLCLLSL VLALPLQAEE KVVNLYSWAD YVAPQTLQRF EQETGYKVRY DTFDTPEVLE
TKLLTGGSGY DVVVPSSTVL ARALKANALQ PLDAQAMPGY GNLDKDLLGK LAEVDPGNRH
AVPYTWGTLG LGVNVEAVRQ RLGDVPLDSL DLLFKPEYAT RLKGCGIALP DSPQEVIGVA
LNYLGKDPYS QNKDDLAAAQ NLLSQLQPSV SYVANGRQIN DLANGSVCLA LTYNGDAAMA
ADQARRAGKP FEVIYRIPRE GTLVWQDNLV IPKDAPHPEA ARAFIAFMLK PESVAALTNT
LFFANANQAA TPLVDEAVRN DPDIYPSAEV RQRLYADRSM ALADLRQRNR LWTAFRSRQ
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