Gene Pput_3537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3537 
Symbol 
ID5193479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3954284 
End bp3954865 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content62% 
IMG OID640587993 
ProductDinB family protein 
Protein accessionYP_001268846 
Protein GI148548744 
COG category[S] Function unknown 
COG ID[COG2318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGC TATCGCATCA TCTGCTGACC CAGGCCTATA ACAATGGCTG GGCCAACCAC 
CGCCTGTACA AGGCCTGCCT GCAACTGACC CAGGACGAGT TCGTCGCCCC GCGTTGCAGC
TTCTTCCCGT CGATCAAGGC CACCCTCAAC CACTTGCTGA CGGTGGATTG GTTTTACCTG
CATATGCTCG AGTGCGAGCA GCGCGGCGAG CAGCCCGATG CCGACGGCGA ACGCTTTTTC
GACCCGGAGC AGCCGTTTGC CACCTGCACC GATCTGCATG CCGAGCAGGC CCAGGCTGAC
CACCGTTTGA TCGCCTACTG CCGGGGGCTG AGTGATGGCG ACCTTGGCCG CTATGTGAGC
GTCGTTCGGC CCGATCGGGT GCAGCGCGAG CAGCGGCTGC GGTTGCTGGC GCATCTGTTC
GAACATCAGG TGCATCACCG TGGGCAGGTG CACGCAATGC TCAGTGATAC AGCGGTCAGG
CCACCACAGC TGGATGAGTT TTTCTGCGAG GAAGAGGCCG AGTTGCGGGC GGGCGACTTT
GCCGAGCTGG GCTGGACAGA AGAGCAGGTC TGGAAAGTGT AA
 
Protein sequence
MQPLSHHLLT QAYNNGWANH RLYKACLQLT QDEFVAPRCS FFPSIKATLN HLLTVDWFYL 
HMLECEQRGE QPDADGERFF DPEQPFATCT DLHAEQAQAD HRLIAYCRGL SDGDLGRYVS
VVRPDRVQRE QRLRLLAHLF EHQVHHRGQV HAMLSDTAVR PPQLDEFFCE EEAELRAGDF
AELGWTEEQV WKV