Gene Pput_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3536 
Symbol 
ID5193478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3953213 
End bp3954211 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content63% 
IMG OID640587992 
Productalpha/beta hydrolase fold 
Protein accessionYP_001268845 
Protein GI148548743 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCG CAACCGCCCT CGCCCTGGCC TGCCTTGCCA GCAGTTCGGC CATCGCTGCC 
GAGTCGCCTA CCTACGGCCC CCAGCTTGAA GGCTTCAGCT ACCCGCACCC CCTCAAGCAT
TTCGACTTCA AGTCCCAGGG CCAGGCCCTG CAGATGGGCT ACATGGACGT GCCCGCCCAG
GGCCAGGCCA ACGGCCACAA CGTGGTGCTG ATGCACGGCA AGAACTTCTG CGCCGCCACC
TGGGAAACCA CCATCGACGC CTTGAGCAAG GCCGGCTACC GGGTCATCGC GCCCGACCAG
GTCGGCTTCT GTACGTCAAG CAAACCGGCG CATTACCAGT ACAGCTTTCA GCAACTGGCC
GACAATACCC ATGCCCTGCT CGAACAGCTG GGTGTGAAAC AAACCATTGT GCTCGGCCAC
TCCACCGGCG GCATGCTGGC CACCCGCTAT GCGCTGATGT ACCCCCAGCA GGTGGAACGC
CTGGCAATGG TCAACCCGAT CGGCCTGGAA GACTGGAAAG CGCTGGGGGT GCCCTACCGC
ACCGTGGACC AGTGGTATGC CCGCGAACTC AAGCTGGATG CCGAAGGCGT ACGTGCATAT
GAGCGCAAGA CCTATTACGC CGGGCGCTGG AAGCCTGAGT ACGAACGCTG GGTGCAGATG
CTGGTGGGCT TGAACAAAGG GCCGGGGCAT GAAGCGGTGG CGTGGAACTC GGCGCTGATC
TACGACATGA TCTTCACCCA GCCGGTGTAC CACGAATTCA AGCACCTGCA GATGCCGACC
CTGCTGCTGA TCGGCGACCA GGACACCACG GCCATCGGCA GCGATATCGC GCCGCCGGAG
GTAAAGGCCA AGCTGGGCAA CTATGCAGAG CTGGGGCCGC AGGTGGCCAA GCTGATACCC
AAAGGTGAGC TGATCACGTT CGAAGGCATG GGGCACGCGC CGCAAATCGA GGAACCGGTG
CGGTTCAATC GCACCCTGGT CGAATGGCTG GGCAAGTGA
 
Protein sequence
MLRATALALA CLASSSAIAA ESPTYGPQLE GFSYPHPLKH FDFKSQGQAL QMGYMDVPAQ 
GQANGHNVVL MHGKNFCAAT WETTIDALSK AGYRVIAPDQ VGFCTSSKPA HYQYSFQQLA
DNTHALLEQL GVKQTIVLGH STGGMLATRY ALMYPQQVER LAMVNPIGLE DWKALGVPYR
TVDQWYAREL KLDAEGVRAY ERKTYYAGRW KPEYERWVQM LVGLNKGPGH EAVAWNSALI
YDMIFTQPVY HEFKHLQMPT LLLIGDQDTT AIGSDIAPPE VKAKLGNYAE LGPQVAKLIP
KGELITFEGM GHAPQIEEPV RFNRTLVEWL GK