| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3530 |
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| Symbol | |
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| ID | 5193684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3948226 |
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| End bp | 3949053 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587987 |
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| Product | phosphonoacetaldehyde hydrolase |
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| Protein accession | YP_001268840 |
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| Protein GI | 148548738 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01422] phosphonoacetaldehyde hydrolase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.359748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTACA ACAACCCCAC CCAACTGCAA GCCGCCATCC TCGACTGGGC TGGCACCGTG
GTCGATTTCG GCTCATTCGC CCCCACCCAG ATCTTTGTCG AGGCCTTTGC CGAGTTCGAC
GTGCAGGTGT CCATCGAAGA AGCCCGAGGC CCGATGGGCA TGGGCAAATG GGACCATATC
CGCACCCTGT GCGACGTACC GGAAATTGCC GAGCGCTACC GCAAGGTGTT CGGCCGTACC
CCGACCGATG ATGACGTCAC CGCCATCTAC AACCGCTTCA TGCCGCTGCA GATCGAGAAG
ATCGCCGTGC ACTCGGCACT GATCCCCGGT GCGCTGGACA CCCTCACCGG TCTACGCCAG
GACGGCCTGA AGATCGGCTC GTGCTCGGGT TACCCGAAAG TGGTGATGGA CAAGGTGGTG
GAACTGGCGG CGCAGAACGG CTACGTAGCC GACCATGTCG TGGCCACCGA CGAAACCCCG
AACGGCCGAC CATGGCCGGC CCAGGCCTTG GCCAACGTGA TTGCGCTGGG GATTGACGAT
GTAGCAGCCT GCGTGAAGGT GGACGACACC GTGCCAGGCA TTCTTGAAGG CCGCCGTGCC
GGCATGTGGA CCGTGGCGCT GGTCTGCTCG GGTAATGCCT TGGGCCTGAC CTGGGAAGGC
TTCCGGGCGT TGAGTGCCGA GAAACTGGAA AGCGAGCGCC AGCGCATCCA CGCACTGTTT
GCCGGCTCCC GCCCGCACTA CCTGATCGAC ACCATCAACG ACCTGCCCGA AGTGATTGCC
GATATCAACC GGCGCCTGGC CAAGGGCGAG ATGCCGCAAG CCTTCTGA
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| Protein sequence | MNYNNPTQLQ AAILDWAGTV VDFGSFAPTQ IFVEAFAEFD VQVSIEEARG PMGMGKWDHI
RTLCDVPEIA ERYRKVFGRT PTDDDVTAIY NRFMPLQIEK IAVHSALIPG ALDTLTGLRQ
DGLKIGSCSG YPKVVMDKVV ELAAQNGYVA DHVVATDETP NGRPWPAQAL ANVIALGIDD
VAACVKVDDT VPGILEGRRA GMWTVALVCS GNALGLTWEG FRALSAEKLE SERQRIHALF
AGSRPHYLID TINDLPEVIA DINRRLAKGE MPQAF
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