| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3528 |
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| Symbol | |
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| ID | 5190799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3946109 |
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| End bp | 3946972 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587985 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001268838 |
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| Protein GI | 148548736 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.235162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT TCCAGCTACG CGCCTTCGAC GCCGTGGCCC GTGAGGGCAG CTTTACCCGT
GCTGCCGAGC GCCTCTTCAT CAGCCAGCCG GCGGTGACCG GGCACGTCAA GGCTCTGGAG
GAGCACTACC AGATCACCTT GCTGCGGCGT ACTGCACGGC GCGTGGAACT GACCGAAGAG
GGCACGCGCC TGGCGGCCAT CACGCGCGCC ATGTTCGGCC TGGCTGAAGA AGCGCAGGCC
ATGCTCGAGG CCAACCGTCA GTTGCTGACC GGGCGCCTGG AGGTAGCCGC CGACGGCCCG
CACCGGGTCA TGCCGATGCT GGCGCTGCTG CGTGAGCGGT ACCCTGGCGT CACCGTCAAC
TTGCGTCTGG GCAATGCACA GGAGACGTTG GCTGCGCTGC TCGGTGAGCA TGCCGACGTG
GCAGTGCTGA CCGAAATCGA GCCGCGCAAA GGGCTGCACC TGCAAAATCT CTGTGAGTCG
CGCCTGTGTG CGTTGTTACC CGTGGGGCAC GCCTGGGCCA GCGAGCGGGA GGACTTGCCG
TTGGCCGAGC TGCACCAGCA GATCATGGTG CTGCGCGAAC CCAGCTCCAC CACCCGGCGC
ACCTTCGACA AGGCCTGCAT CAAGGCGGGC GTGCAACCGC GTGTATTGCT GGAGCTGGAC
AGCCGGGAGG CGGTAACCGA GGCAGTGGCC TCGCAGCTGG GTATTGGCGT TGTTTCTTCC
ACTGAAGTGG CCAATGATCC CCGTGTGGTG GCACGACCCT TGGCCGGCGA GGGCCTTGTC
AACCAACACG TGATCGGCTG CCTGGAGCGC CGTCGCGAAC TGCGCCTGAT TCAGGCATTC
CTGAGCCTGG CAGCGGGGCT ATGA
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| Protein sequence | MNLFQLRAFD AVAREGSFTR AAERLFISQP AVTGHVKALE EHYQITLLRR TARRVELTEE
GTRLAAITRA MFGLAEEAQA MLEANRQLLT GRLEVAADGP HRVMPMLALL RERYPGVTVN
LRLGNAQETL AALLGEHADV AVLTEIEPRK GLHLQNLCES RLCALLPVGH AWASEREDLP
LAELHQQIMV LREPSSTTRR TFDKACIKAG VQPRVLLELD SREAVTEAVA SQLGIGVVSS
TEVANDPRVV ARPLAGEGLV NQHVIGCLER RRELRLIQAF LSLAAGL
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