| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3527 |
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| Symbol | |
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| ID | 5190798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3944886 |
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| End bp | 3945908 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587984 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001268837 |
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| Protein GI | 148548735 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA AAGACACCAT TTCCATGCAG CTGGTGCGCG AAGCGCTGTT GCAGACCTGC
CCTGCCGGTG AGCCTGACAG TGGCTTGCTG GCCAGGGCGG GCATCGCCGT TGAACAATTG
CACCTGCCAG AGGCAAGGGT CAGTGCCGAG TCCTATGCCC GCCTGTGGCG CTTGCTGGCC
CGGCGCTGCA ACGACGAATT TTTCGCGATG GACCCGCGCG GTCTGCGCAG TGGCAGCCTG
GCATTCATGT GCCGTGCCAG CATGGGCCAA CCAACTCTGG GTGCAGGCCT GGAAACCTCG
CTGGCATTTC TGTCGCTGAT GCTTCAAGAC ATGCAGCCCA GCCTGGTGCG CCAGCAAGGC
CTGGCCGAAA TTGTCATCAA TGAGCCGCGT GACGAACCGC GCCGCGCGTT CACCTATTTC
ACGTTCTGGA TGATCGTGCA TGGCGTGACC TGCTGGCTGG CCGGGCGGCG TATCCCGATT
CTGAGCATTG ATCTGCGGTG TACCGAACCA CCCTTTTGCG ACGACTACCG GGTCATGTTT
TCGGAAAACC TGCATTTTGA GCGTCCACGC ACACGCATGA TCATCGCTTC GCAATGCCTC
GACTTGCCCC TGCGGCGCAG TGAAGAGGAA CTGCAGCGTT TTCTGGCCGA AGCGCCGGGC
AATATCCTGG TCAAATACCG TGACCCGGCC AGCCTCGGGC GGCGTATCCG CACCGACCTG
CTGCGCCTGG CCCCTGCGCA GTGGCCCGAT GCTGACCGCC TGGCCCGGCA GCTGTGCCTG
TCGCCATCGA CCCTGCGGCG GCGCCTGGCA GAAGAGGGGC AGAACTACCA GGGCTTGAAG
GACAGCGTAC GACGGGAGCT GGCGATCGCC TGGCTCAGCC AGGAAGACCT GGCCATGGGC
GAGCTTGCCG AGCGCTTGGG GTTCGCCGAC AGCAGCTCGT TCTATAAGGC ATTTCGCAAG
TGGTTCGGCT GCAACCCAGG GCATTATCGG GCATTGATCC AGGCGCGAGG GGCAGGGCAC
TGA
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| Protein sequence | MSDKDTISMQ LVREALLQTC PAGEPDSGLL ARAGIAVEQL HLPEARVSAE SYARLWRLLA
RRCNDEFFAM DPRGLRSGSL AFMCRASMGQ PTLGAGLETS LAFLSLMLQD MQPSLVRQQG
LAEIVINEPR DEPRRAFTYF TFWMIVHGVT CWLAGRRIPI LSIDLRCTEP PFCDDYRVMF
SENLHFERPR TRMIIASQCL DLPLRRSEEE LQRFLAEAPG NILVKYRDPA SLGRRIRTDL
LRLAPAQWPD ADRLARQLCL SPSTLRRRLA EEGQNYQGLK DSVRRELAIA WLSQEDLAMG
ELAERLGFAD SSSFYKAFRK WFGCNPGHYR ALIQARGAGH
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