| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3524 |
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| Symbol | |
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| ID | 5190912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3937744 |
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| End bp | 3938511 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587981 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001268834 |
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| Protein GI | 148548732 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.208712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATAG CCAATAAACA TTTCATCGTC AGTGGCGCCG CTTCCGGGCT GGGTGCCGCG
ACTGCACAGA TGCTGGTCGA GGCTGGCGCC AAGGTCATGC TGGTCGACCT CAATGCCCAG
GCTGTCGAAG CCAAGGCCCG CGAACTGGGC GACAACGCCC GTTTCGCCGT GGCTGATATC
AGTGACGAGC AGGCGGCCCA GTCGGCTGTC GATGCAGCTG TCAGCGCCTT TGGCAGCTTG
CATGGGTTGG TCAATTGTGC CGGCATCGTC GGTGCCGAGA AGGTGCTGGG CAAGCAGGGC
CCGCATGGCC TGGCCAGCTT CGCCAAGGTC ATCAACGTCA ACCTGATCGG CAGCTTCAAC
CTGTTGCGTC TGGCTGCGGC GGCCATGGCC GAAGGGGCTG CCGATGAGAG CGGCGAGCGT
GGGGTCATCA TCAACACGGC CTCCATTGCC GCCTATGACG GCCAGATTGG CCAGGCCGCC
TACGCTGCCT CCAAGGGGGC CATTGCCAGC CTGACCTTGC CGGCCGCGCG CGAACTGGCA
CGCTTCGGCA TCCGCGTGAT GACCATCGCT CCGGGCATCT TTGAAACACC TATGATGGCC
GGCATGAGCG ATGAGGTGCG TGCTTCACTG GCTGCCGGCG TGCCGTTCCC GCCCCGCTTG
GGCCGCCCGC AGGAATACGC CGCGCTGGCC CGCCACATCA TCGAGAACAG CATGCTCAAC
GGTGAGGTCA TCCGCCTCGA CGGTGCGCTG CGCATGGCTG CCAAGTAA
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| Protein sequence | MHIANKHFIV SGAASGLGAA TAQMLVEAGA KVMLVDLNAQ AVEAKARELG DNARFAVADI
SDEQAAQSAV DAAVSAFGSL HGLVNCAGIV GAEKVLGKQG PHGLASFAKV INVNLIGSFN
LLRLAAAAMA EGAADESGER GVIINTASIA AYDGQIGQAA YAASKGAIAS LTLPAARELA
RFGIRVMTIA PGIFETPMMA GMSDEVRASL AAGVPFPPRL GRPQEYAALA RHIIENSMLN
GEVIRLDGAL RMAAK
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