Gene Pput_3521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3521 
Symbol 
ID5191037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3934616 
End bp3935389 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content61% 
IMG OID640587978 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001268831 
Protein GI148548729 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.759702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0494202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCG AAACCATCCT GTTGGACATC CACGGCAAGG TCGGCCTGAT CACCCTCAAC 
CGCCCGCAGG CGCTCAATGC GCTGAACGCG CAGATTGTCG GTGAGATCAA CCAGGCCTTG
GACCAGCTTG AGCGCGACCC GAACATCGGC TGCGTGGTGC TGACAGGCTC GGCCAAAGCC
TTTGCCGCTG GCGCCGACAT CAAGGAAATG GCTGAGCTGC AATACCCGCA GATCTACGTC
GACGACCTGT TCAGCGACGC CGACCGCATT GCCAATCGCC GTAAGCCGAT CATTGCTGCC
GTGTCTGGAT TTGCCCTGGG CGGCGGCTGT GAGTTGGCGA TGATGTGCGA CTTTATCCTC
GCTGCGGACA ATGCCAAATT TGGTCAACCG GAAATCAACC TGGGCGTGCT GCCGGGCATG
GGCGGCACCC AGCGGCTGAC GCGTGCGGTG GGCAAGGCGA AGGCCATGGA GCTTTGCCTG
ACCGGCCGCC TGATGGGGGC GGAAGAAGCC GAGCGAGCAG GTTTGGTGGC GCGGATCGTG
CCGCAGGCAG AGCTGGTGGA AGAGGCGCTG AAGGTGGCGG CGACCATTGC CAGCAAGTCG
ATTCCGGTGA GCATGATGGT CAAGGAGAGC GTCAACCGAG CATTTGAAGT CACCCTCAGC
GAGGGGGTTC GTTTTGAGCG TCGGGTCTTC CATGCGGCGT TCTCCACCGA AGACCAGAAA
GAAGGCATGG CCGCATTCAT CGCCAAGCGT GAGGCACAGT TCAAGGACCG TTGA
 
Protein sequence
MAFETILLDI HGKVGLITLN RPQALNALNA QIVGEINQAL DQLERDPNIG CVVLTGSAKA 
FAAGADIKEM AELQYPQIYV DDLFSDADRI ANRRKPIIAA VSGFALGGGC ELAMMCDFIL
AADNAKFGQP EINLGVLPGM GGTQRLTRAV GKAKAMELCL TGRLMGAEEA ERAGLVARIV
PQAELVEEAL KVAATIASKS IPVSMMVKES VNRAFEVTLS EGVRFERRVF HAAFSTEDQK
EGMAAFIAKR EAQFKDR