| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3512 |
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| Symbol | |
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| ID | 5194963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3927671 |
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| End bp | 3929350 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587969 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_001268822 |
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| Protein GI | 148548720 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.523861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00169463 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGATA TCAGTCAACT GATTGTCGCC CCCATCCTGC TGCCGCTGAT TACGGCGGCG
ATGATGTTGC TGCTGGGTGA AAAGCACAGG CACATCAAGG CCAGGCTGAA CCTGCTGTCT
ACCTTCTCCG GCCTGGTGAT CGCGGTCTGT CTGCTGCTGT GGGTGCGCAC CCAGGGCCAG
GCAGCGTCGA TCGGCGTGTA CCTGCCGGGC AACTGGCCGG CGCCATTCGG CATCGTGCTG
GTGGTGGACC ACCTGTCCGC GCTCTTGCTG ACCCTGACCG GGGTCATCGG TTTCAGCGCG
CTGCTATTTG CCCGTGCCCG CTGGGACGGT GCAGGGGCCA GCTTCCATGC GCTGTTCCAG
ATCCAGCTGA TGGGGCTGTA CGGCGCCTTC CTCACCGCCG ACCTGTTCAA CCTGTTCGTC
TTCTTCGAAG TGCTGCTGGC CGCCTCCTAT GGCCTGCTGC TGCATGGTTC GGGGCGTGCG
CGGGTGCGCG CCGGCCTGCA CTACATCGCT ATCAACCTGT TCGCCTCGTC GCTGTTCCTG
ATCGGCGCAG CGATGCTGTA TGGCGTGACC GGCACCCTGA ACATGGCGGA CCTGGCGCTG
AAGATTCCAC TGGTACCGGA GGCCGACCGC GGCCTGCTGC ATGCCGGCGC GGCAATCCTG
GCCATGGCCT TCCTGGTCAA GGCCGGTATC TGGCCGCTGA ACTTCTGGCT GGTGCCAGCT
TACGCGTCTG CCAGCGCGCC GGTGGCTGCA CTGTTCGCCA TCATGACCAA AGTCGGCCTG
TACGCCGTGC TGCGCCTGTG GACGTTACTG TTCTCCGGGC AGGCCGGGGC CTCGGCACAT
TTCGGCGGCG AATGGCTGGT TTACGGCGGC CTGGTTACCC TGGCGGTGGC AGCGGTATCA
ATCCTGGCGG CACAGCGCCT GGAGCGTATG GCGGCACTCA GTATCCTGGT CTCGGCCGGC
ACGCTGCTGG GTGCGGTGGG TTTTGCCCAG GCGGCTCTGA CCGGCGCGGC GTTGTTCTAT
CTGGTCAACT CAACCCTTGC GCTGTGCGCA CTGTTCCTGC TCGCCGAACT GGTCGAACGC
TCGCGCTCCG CCAATGAAGC GCCGCTGGAC GAAGAAGAAG ACGCCATGCC GCCGCCACTG
GAATCGCTGC ACCCGCCCAA GGGCATCAAC CTCGACGATG AACAGCAGGT GGTAATCGGC
CAGATCATCC CGTGGACCAT GGCCTTCCTC GGCCTCAGCT TCATCGCCTG TGCACTACTG
ATCATCGGCA TGCCGCCGCT GTCGGGCTTT GTCGGCAAGC TCAACCTGAT CAGTGCGCTG
TTCAATCCAC TGGGCCTCGG CGTACCGGCC GAGCAGCCCC TGAGTGCCGC CGGCTGGGGC
CTGGTGGCGT TGCTGATCCT GTCCGGCATG GCCTCGCTGA TCGCCTTCGG CCGCGTCGGC
ATCCAGCGTT TCTGGAAGCC CGAAGAGCGT CCGTCCCCGG TCCTGCGGCG CTATGAATGC
CTGCCCATTG TCATCTTGCT CGGCCTGTGC CTCATCCTCA GCCTCAAGGC CGAGCCGTTG
CTGCGCTACA CCCAGGACAC TGCCGCCAGC CTGCAGGCCC CCGATGCCTA TATCGACGCC
GTGATGGCCG CCCGGCCGAT TCCTGGCCCC ACCTCGCGCG ACGTACAGGT GCAGCCATGA
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| Protein sequence | MSDISQLIVA PILLPLITAA MMLLLGEKHR HIKARLNLLS TFSGLVIAVC LLLWVRTQGQ
AASIGVYLPG NWPAPFGIVL VVDHLSALLL TLTGVIGFSA LLFARARWDG AGASFHALFQ
IQLMGLYGAF LTADLFNLFV FFEVLLAASY GLLLHGSGRA RVRAGLHYIA INLFASSLFL
IGAAMLYGVT GTLNMADLAL KIPLVPEADR GLLHAGAAIL AMAFLVKAGI WPLNFWLVPA
YASASAPVAA LFAIMTKVGL YAVLRLWTLL FSGQAGASAH FGGEWLVYGG LVTLAVAAVS
ILAAQRLERM AALSILVSAG TLLGAVGFAQ AALTGAALFY LVNSTLALCA LFLLAELVER
SRSANEAPLD EEEDAMPPPL ESLHPPKGIN LDDEQQVVIG QIIPWTMAFL GLSFIACALL
IIGMPPLSGF VGKLNLISAL FNPLGLGVPA EQPLSAAGWG LVALLILSGM ASLIAFGRVG
IQRFWKPEER PSPVLRRYEC LPIVILLGLC LILSLKAEPL LRYTQDTAAS LQAPDAYIDA
VMAARPIPGP TSRDVQVQP
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