Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3510 |
Symbol | |
ID | 5194086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3924415 |
End bp | 3927330 |
Gene Length | 2916 bp |
Protein Length | 971 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640587967 |
Product | putative monovalent cation/H+ antiporter subunit A |
Protein accession | YP_001268820 |
Protein GI | 148548718 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
TIGRFAM ID | [TIGR00940] Tmonovalent cation:proton antiporter [TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00329797 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCCTTGA TAGTGCTATT GCTTCTGCCG TTCGTGGGCA GTTGCCTGGC AGCTGTGCTG CCGCACAACG CACGTAACGC CGAGTCCATT CTTGCCGGGC TCGTAGCCCT GGTCGGCACC GTCCAGGTAG CACTTCTGTA CCCTCAGATT GCCCATGGTG GCGTCATTCG CGAAGAGTTC CTGTGGTTAC CCAGCCTGGG GCTGAACCTG GTGTTGCGCA TGGACGGCTT TGCCTGGCTG TTCTCGTTGC TGGTACTGGG CATTGGCACG CTGGTATCGC TGTATGCGCG CTACTACATG TCACCGCAAG ACCCGGTACC ACGCTTCTTC GCGTTCTTCC TGGCCTTCAT GGGCGCCATG CTCGGCCTGG TCATCTCCGG CAACCTGATC CAACTGGTGT TCTTCTGGGA ACTGACCAGC CTGTTCTCCT TCCTGCTGAT CGGCTACTGG CACCACCGCG CCGACGCCCG TCGCGGCGCC TACATGGCGC TGATGGTAAC CGGTGCAGGC GGCTTGTGCC TGCTGGTAGG GGCCCTGCTG CTCGGCCATG TGGTCGGCAG CTATGACCTG GACAAGGTCC TGGCTGCCGG GCATACCATC CGCCAGCATG CGCTTTACCC GGTGCTGCTG CCCCTGATAC TCATCGGCGC CCTGACCAAG AGCGCACAGT TTCCCTTCCA GTTCTGGCTG CCCCACGCCA TGGCAGCGCC CACACCGGTG TCGGCCTATT TGCATTCGGC CACCATGGTC AAGGCCGGGG TGTTCCTGCT GGCACGCCTG TGGCCGGTAC TCTCCGGTAG CGAGGAGTGG TTCTGGATCG TCGGCGGTGC CGGCGCCCTC ACCCTGCTGC TCGGCGCTTT CGCCGCCATG TTCCAAAATG ACCTCAAGGG CCTGCTGGCC TATTCGACCA TCAGCCACCT GGGCCTGATT ACCCTGCTGC TGGGCCTTAA CAGCCCGCTG GCTGCCGTCG CCGCGGTATT CCACATTCTC AACCATGCCA CCTTCAAGGC CTCGCTGTTC ATGGCCGCCG GCATCATCGA CCACGAGAGC GGCACCCGTG ACATTCGCCG CCTCAGCGGC CTGATCCGCC TGGTGCCCTA CACCGCGACC CTGGCCATGG TCGCCAGCGC CTCGATGGCC GGCGTGCCGC TGATGAACGG CTTCCTGTCG AAGGAAATGT TCTTCGCCGA AACGGTATTC ATCAGCTCCA CCGCCTGGGT CGAGGCCACG CTGCCGGTGA TCGCCACCCT GGCCGGCACC TTCAGCGTGG CGTATGCCCT GCGCTTTACC GTCGATGTGT TCTTCGGGCC GACGGCCCAG GACCTGCCCC ATACCCCGCA CGAGCCGCCA CGCTGGATGC GTGCTCCGGT GGAACTGCTG GTGCTCACGT GCCTGGTCGT GGGCATCTTC CCCACACAGT CGGTCGGCCC CCTGTTGGCC GCTGCGGCCC TGCCGGTGGT TGGCGGCACC CTGCCGGAAT ACAGCCTGGC CATCTGGCAT GGCTGGAACG CGCCGATGAT CATGAGCCTG GTCGCCATGA GCGGCGGCAT CGTCCTGTAC CTGTTGCTGC GCAAACAACT GCGCCTGGGT CGCTTCCCCT ACCCGCCCGT GATCGAGCGC TTCAATGGCA AGCGGCTGTT CGAGCACGGC CAGGTTCACC TGATGTTGCT GGCGCGTCGC ATCGAACGCC TGTTCACCAC CCGGCGGCTG CAGTCGCAGC TGTTCATGCT GGTATTCGCC GCGTTCCTCG CGGGCCTCAC GCCGATGCTC CATAGCGGCC TGAGCTGGGG TGATCGCCCG AAGATTCCGG GTTCCGGTGT ATTCGTCGCC CTGTGGCTGA TCGCCATTGC CTGCGCCATC GGCGCCGCCT ACCAGGCCAA GTACCACCGC CTGGCGGCAC TGATCATGGT CAGCGTCTGC GGCCTGATGA CCTGCATCAC CTTCGTCTGG TTCTCTGCGC CCGACCTGGC ACTGACCCAG TTGGTGGTGG AAGTGGTCAC CACCGTGCTG ATCCTGCTCG GCCTGCGCTG GCTGCCACGG CGTATCGAAG GCGTGTCACC GCTGCCGGGT AGCCTGGAGC GCGCGCGCAT GCGCCGCCTG CGCGACTTGC TGCTGGCCGT GCTGGTGGGT GGCGGCATGG CCGTGCTGTC GTACGCCATG CTGACCCGAC CCACGCCCAA CGACATTTCC TCGTTCTATT TGAGCCGTGC GTTGCCTCAG GGCGGCGGCA CCAATGTGGT CAATGTCATG CTGGTCGACT TCCGCGGCTT CGATACCCTC GGTGAAATCA CCGTGTTGGT GGCTGTGGCA CTGACGGTGT TCGCCCTGCT ACGGCGCTTC CGTCCTCCAA AAGAGAGCAT GCAGCTGCCG GCGCAACAAC GCCAGCTGGC GCCGGACGTA GTCACCGACC TGATCAACCC GCGGCATGCC ACCGATACCG CGCTGGGCTT CATGATGGTG CCGGCAGCGC TGGTGCGCCT GCTGCTGCCG ATCGCCTTGC TGGTGTCGAT GTACCTGTTC ATGCGCGGGC ACAACCAGCC CGGTGGCGGG TTTGTCGCTG GCTTGGTCAT GTCGGTGGCG TTCATCCTCC AGTACATGGT GGCCGGCACC CAGTGGGTCG AGGCGCAGAT GAGCCTGCGG CCGCTGCGCT GGATGGGTAC CGGGCTGCTG TGCGCGACCC TGACCGGCGT CGGCGCCATG CTGCTGGGTT ACCCGTTCCT CACCACCCAT ACCGCCCACT TGCACCTGCC GTTGCTGGGT GATGTGCACG TGGCCAGCGC GCTGTTCTTC GATATTGGCG TATACACCGT CGTGGTCGGC TCGACCCTGC TGATCCTCAC GGCCCTGGCG CACCAGTCGG TGCGCGCCTA CCGCCCGGGC AACCCGGCAA AAACCAGCCA AGCAGGAGCC GCCTGA
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Protein sequence | MSLIVLLLLP FVGSCLAAVL PHNARNAESI LAGLVALVGT VQVALLYPQI AHGGVIREEF LWLPSLGLNL VLRMDGFAWL FSLLVLGIGT LVSLYARYYM SPQDPVPRFF AFFLAFMGAM LGLVISGNLI QLVFFWELTS LFSFLLIGYW HHRADARRGA YMALMVTGAG GLCLLVGALL LGHVVGSYDL DKVLAAGHTI RQHALYPVLL PLILIGALTK SAQFPFQFWL PHAMAAPTPV SAYLHSATMV KAGVFLLARL WPVLSGSEEW FWIVGGAGAL TLLLGAFAAM FQNDLKGLLA YSTISHLGLI TLLLGLNSPL AAVAAVFHIL NHATFKASLF MAAGIIDHES GTRDIRRLSG LIRLVPYTAT LAMVASASMA GVPLMNGFLS KEMFFAETVF ISSTAWVEAT LPVIATLAGT FSVAYALRFT VDVFFGPTAQ DLPHTPHEPP RWMRAPVELL VLTCLVVGIF PTQSVGPLLA AAALPVVGGT LPEYSLAIWH GWNAPMIMSL VAMSGGIVLY LLLRKQLRLG RFPYPPVIER FNGKRLFEHG QVHLMLLARR IERLFTTRRL QSQLFMLVFA AFLAGLTPML HSGLSWGDRP KIPGSGVFVA LWLIAIACAI GAAYQAKYHR LAALIMVSVC GLMTCITFVW FSAPDLALTQ LVVEVVTTVL ILLGLRWLPR RIEGVSPLPG SLERARMRRL RDLLLAVLVG GGMAVLSYAM LTRPTPNDIS SFYLSRALPQ GGGTNVVNVM LVDFRGFDTL GEITVLVAVA LTVFALLRRF RPPKESMQLP AQQRQLAPDV VTDLINPRHA TDTALGFMMV PAALVRLLLP IALLVSMYLF MRGHNQPGGG FVAGLVMSVA FILQYMVAGT QWVEAQMSLR PLRWMGTGLL CATLTGVGAM LLGYPFLTTH TAHLHLPLLG DVHVASALFF DIGVYTVVVG STLLILTALA HQSVRAYRPG NPAKTSQAGA A
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