| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3509 |
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| Symbol | |
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| ID | 5194085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3923315 |
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| End bp | 3924265 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587966 |
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| Product | hypothetical protein |
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| Protein accession | YP_001268819 |
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| Protein GI | 148548717 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0160994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGC CCAGCAGCAA GCCTACCCCT GCCGTCACCT TCCGCCTGAG CAAGGCCGAA
CTGGTGCTGG TATTCATCAC CATGTTGTGG GGCGGCACTT TCCTGTTGGT GCATAACGTG
ATGACCGTCA GCGGCCCGAT GTTCTTCGTC GGCCTGCGTT TTGCGGCAGC CGCGCTGTTC
GTTGGTGTGG TCTCGGCGCG AGCGCTGCCC GGCCTGACCT TCACCGAACT GAAGGCCGGC
ATGCTGATCG GCGTGTCGAT CATGCTCGGC TATGGCCTGC AGACCATGGG CCTGCAAACC
ATCAGCAGCA GCCAGTCAGC GTTCATCACT GCGCTGTACG TCCCGTTCGT GCCGCTGCTG
CAGTGGCTGG TGCTGGGGCG GCGGCCTGGC CTGATGCCCA GCATGGGTAT CTGCCTGGCA
TTCATCGGCC TGATGCTGCT GGCCGGGCCG GAAGGCGGCA GCCTGCGTTT CAGCGAGGGC
GAACTGGTCA CCCTGATCAG CGCCGTGGCC ATCGCCGGTG AAATCATTCT GATCAGCCGC
TACGCCGGTC AGGTCGATGT GCGCCGGGTT ACGGTGGTGC AACTTGCGAC CGCATCGCTG
CTGGCGTTTC TCATGATCGT GCCGACCCAG GAGCGCCTCC CCGACTTCTC CTGGCTGTTG
CTTGCCAGCG CAGTGGGCCT GGGCGCAATG AGTGCGGTGA TCCAAGTGGC AATGAACTGG
GCACAGAAGT CGGTCTCGCC TACCCGCGCC ACACTCATCT ATGCCGGTGA ACCGGTGTGG
GCCGGCATCG TCGGGCGTCT GGCTGGCGAG CGCCTGCCTG GCGTGGCGCT GCTCGGCGGC
CTGCTGATCG TGGTTGCCGT GGTGGTCAGT GAACTCAAGG TGCGACGCCC TCGCGAAACC
GTCGAAACAC GCGATGTGCA GAACCCAGGC GAAGGCCAGG CGGGGCTGTA A
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| Protein sequence | MNQPSSKPTP AVTFRLSKAE LVLVFITMLW GGTFLLVHNV MTVSGPMFFV GLRFAAAALF
VGVVSARALP GLTFTELKAG MLIGVSIMLG YGLQTMGLQT ISSSQSAFIT ALYVPFVPLL
QWLVLGRRPG LMPSMGICLA FIGLMLLAGP EGGSLRFSEG ELVTLISAVA IAGEIILISR
YAGQVDVRRV TVVQLATASL LAFLMIVPTQ ERLPDFSWLL LASAVGLGAM SAVIQVAMNW
AQKSVSPTRA TLIYAGEPVW AGIVGRLAGE RLPGVALLGG LLIVVAVVVS ELKVRRPRET
VETRDVQNPG EGQAGL
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