| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3508 |
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| Symbol | |
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| ID | 5190642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3922667 |
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| End bp | 3923230 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587965 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001268818 |
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| Protein GI | 148548716 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0510026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACAAGG ATTCTTCGCA CCGGGCATCG GTGCTGCAAC ATGTCAGCCT CAATGTGCGC
AGTCTGCGCA ACGCCGCCGG CTTGAGTCAG GCGGCGCTGG CCGAGCGTTC AGGGGTCAGC
CGGCGCATGC TGGTCGCGAT CGAGGCGGGC GAGAAGAATG TCAGCCTGAC CACATTGGAC
CTGATTGCCG AAGCCTTGGG CGTGGCTTTC AGTACCCTGA TCCAGGCGCC AGACCTGCGC
GACCCCGGGC GCATTGAAGA GCTGGCGTGG GCTGGCGAAC ACCCGCAGAG CCGAGCGGTA
TTGCTGGGCT CCAGCCCGGC AAGGCGCGAG GTGGAACTTT GGGAATGGAC CCTGGCACCG
GGGGAGTGCT ATCACAGTGA GGCCGATGCC GAAGGCTGGA GCGAGCAGAT TTATGTGATC
GATGGGCAGC TGACGCTGAT CATCGAAGAG GTCGAGCATC GCTTGCAGGT GGGGCAGTTC
CATGTGTTCC CCAGCAACTG CCGGTATGCC TACCGTAACG ATGGCGTGGT GGCTGTTCGG
TTTGTGCGCA ATGTGGCGAT TTGA
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| Protein sequence | MHKDSSHRAS VLQHVSLNVR SLRNAAGLSQ AALAERSGVS RRMLVAIEAG EKNVSLTTLD
LIAEALGVAF STLIQAPDLR DPGRIEELAW AGEHPQSRAV LLGSSPARRE VELWEWTLAP
GECYHSEADA EGWSEQIYVI DGQLTLIIEE VEHRLQVGQF HVFPSNCRYA YRNDGVVAVR
FVRNVAI
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