Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3508 |
Symbol | |
ID | 5190642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3922667 |
End bp | 3923230 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640587965 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001268818 |
Protein GI | 148548716 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0510026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACAAGG ATTCTTCGCA CCGGGCATCG GTGCTGCAAC ATGTCAGCCT CAATGTGCGC AGTCTGCGCA ACGCCGCCGG CTTGAGTCAG GCGGCGCTGG CCGAGCGTTC AGGGGTCAGC CGGCGCATGC TGGTCGCGAT CGAGGCGGGC GAGAAGAATG TCAGCCTGAC CACATTGGAC CTGATTGCCG AAGCCTTGGG CGTGGCTTTC AGTACCCTGA TCCAGGCGCC AGACCTGCGC GACCCCGGGC GCATTGAAGA GCTGGCGTGG GCTGGCGAAC ACCCGCAGAG CCGAGCGGTA TTGCTGGGCT CCAGCCCGGC AAGGCGCGAG GTGGAACTTT GGGAATGGAC CCTGGCACCG GGGGAGTGCT ATCACAGTGA GGCCGATGCC GAAGGCTGGA GCGAGCAGAT TTATGTGATC GATGGGCAGC TGACGCTGAT CATCGAAGAG GTCGAGCATC GCTTGCAGGT GGGGCAGTTC CATGTGTTCC CCAGCAACTG CCGGTATGCC TACCGTAACG ATGGCGTGGT GGCTGTTCGG TTTGTGCGCA ATGTGGCGAT TTGA
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Protein sequence | MHKDSSHRAS VLQHVSLNVR SLRNAAGLSQ AALAERSGVS RRMLVAIEAG EKNVSLTTLD LIAEALGVAF STLIQAPDLR DPGRIEELAW AGEHPQSRAV LLGSSPARRE VELWEWTLAP GECYHSEADA EGWSEQIYVI DGQLTLIIEE VEHRLQVGQF HVFPSNCRYA YRNDGVVAVR FVRNVAI
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