| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3506 |
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| Symbol | |
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| ID | 5190811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3920995 |
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| End bp | 3921987 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587963 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001268816 |
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| Protein GI | 148548714 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.939341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0589755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCAA AAACTGACAC CGGCGCTAAC CTGGATATCG GCTTGCTGCT ATACCCCGGC
GTGCAGCGCG CCGCTGTGCA TGGCCTGGCC GACCTGTTCC TGGTGGCCAA CCGGGTTGCG
GCCGAGCTGG GGGCCGTCGA GCTGCCGCAC ATTCGCGTCA GTTGCTGGCA GGCAGATGAG
GCGGGGCAGT TGTTGCCTGC GCCGGATAAC TCAGCTGTCA CCGTGCCGGG CCTGCGCGTC
CTGATCATTC CGCCAAGCCT GGAGTCAGCT CCGCAAGCCG AGTTGCTCGA ACGTCATCGC
GCGCCGCTGT GCCTGCTGCA CGGGCGTGGT ACGGTGCTGG CGTCGGTATG CATCGGTGTA
TTTTTCATTG CCGCCAGCGG TTTGCTCGAT GGGCGCCCGG CCTGCACGCA CTGGAATTAT
GTGCATGCGC TTGCCCAGCG CTTCCCCAGG GTGCGGGTAG AGGCCCAGCA GCCGTTGCTG
GATGACGGCG ACATCGTGAC CTCGGCAGGG TTGATGGCCT GGACGGACCT CGGCTTGCGC
TTGCTGGAGC GCTTTTTGGG GGCGACGGTG GCTCAGGAGA CCGCTCGCTA TCTGGCCGTC
GATCCGGTCG CGGCGCCGCT GCCCGGCGCT GTGTTCAACC CGCGCCTGGA CCACGGCGAC
GAGGCCGTGT TGAAGGTGCA GCACTGGTTG CAGGGCAATG GCGGGCAGGA TGCTGACCTG
GCCACGATGG CTGCCTGCGC GGGGCTGGAG GCGCGCACTT TCTTGCGGCG CTTTCGTGCC
GCTACCGGGC TGCGCCCGAC CGAGTATTGC CAGCAGGTGA GGGTGGGGCG TGCATGCCGC
TTGCTGGAGT TTACCCGGCG CACCGTCGAA CAGATCGCGT GGGGTGTCGG CTATCAGGAT
CCGGGCGCCT TTCGCAAGGT ATTCCAGCGT GTCACTGGCC TTACCCCGAG TGAATATCGG
CGGCGGTTTG CGGTATCCGG CCAGGCGCTA TAG
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| Protein sequence | MRAKTDTGAN LDIGLLLYPG VQRAAVHGLA DLFLVANRVA AELGAVELPH IRVSCWQADE
AGQLLPAPDN SAVTVPGLRV LIIPPSLESA PQAELLERHR APLCLLHGRG TVLASVCIGV
FFIAASGLLD GRPACTHWNY VHALAQRFPR VRVEAQQPLL DDGDIVTSAG LMAWTDLGLR
LLERFLGATV AQETARYLAV DPVAAPLPGA VFNPRLDHGD EAVLKVQHWL QGNGGQDADL
ATMAACAGLE ARTFLRRFRA ATGLRPTEYC QQVRVGRACR LLEFTRRTVE QIAWGVGYQD
PGAFRKVFQR VTGLTPSEYR RRFAVSGQAL
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