| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3484 |
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| Symbol | |
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| ID | 5192374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3892353 |
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| End bp | 3893051 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587936 |
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| Product | GntR domain-containing protein |
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| Protein accession | YP_001268794 |
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| Protein GI | 148548692 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0607093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.647045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAGCT CATCAACCGT CGTCAACTCA GTGGTGGAAA AACTCCGCCA GGCCCTGGCC
CGCGGCCAAT GGCGCACCGG CGACATGCTG CCAGGCCAGC GCGAACTGGC CGAACAACTG
GGCATCAGCC GCCCCAGCCT GCGCGAAGCG GTAACCGTGC TGGAAACACT GGGCCTGGTG
CGCTCGTTAC CCGGCAAGGG CGTGTTGGTG CTGGATGCCG ATGCCCAGGC GTCGGGCGTG
GAAACCAGCG CAGCGGCCAG CCTGGCCGAC GTGCTGGAAC TGCGCTACAC ACTCGAACCG
TTCATCGTCG GCCTGGTGGC GCAGTCGGCC AACAGCCAGG ACATCGGCCA GTTGCGCCTG
ACCCTGATGG ACATGCGCGA AGCGCTGGAG GCCGATGATA GCGAGGCCGG GGTCAAAGCC
TACATAGCCT TCCATGAGGC GCTGTTCGCC CTGACCACCA ACCCGATTTT CCAGAGCGTG
GTGCAGCAGA CCGGCAATGC CCTGAAGCAA AGCGCCGACA TGCTGCGCAA CTCGCCAGAG
CACCTGGCCG CGCGGCTGAA GGAAAACGAA GCGGTGGTGC GCGCCATTCG CGAACGCAGC
AGCGCCCAGG CCAGTGCCCA GATGCGTCAG CACATCGTGG CCGAAGGGCT GCGCATGGGC
ATCGCGTTGA ATATCCCGGA CGAACATCCA CATCCATGA
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| Protein sequence | MISSSTVVNS VVEKLRQALA RGQWRTGDML PGQRELAEQL GISRPSLREA VTVLETLGLV
RSLPGKGVLV LDADAQASGV ETSAAASLAD VLELRYTLEP FIVGLVAQSA NSQDIGQLRL
TLMDMREALE ADDSEAGVKA YIAFHEALFA LTTNPIFQSV VQQTGNALKQ SADMLRNSPE
HLAARLKENE AVVRAIRERS SAQASAQMRQ HIVAEGLRMG IALNIPDEHP HP
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